Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1739 ATGGAAACTTCTACAAAACATTCCTATGGGTCCGGAAGGTTCTATGTTGAGCACCAAGACTATAACTCATCTGATAACACCAGCCAAGCAACAACTTACTCTTCAGTTCAGACTTTAGAACAACATTACACCCTAGAATCTGCCCCAATAACAAACAGTTTTCCAAACCATAATAATTCTCCATCCACTGCCCATTTCTCGCCTAATGACAGCCCTGCGTCACAGCTGGAGTCAAATTCTTGTGCCCTAATGTCTCAACACTCACTCGAAATCATCAATGGCTCTTTTGAGAATGAATCTTGCTTGACAAATGACTTTGATGACTTGAGCCTTGTGATAAGAGAGTTTGAAACTGCTATGCAGGGACCTGATACAGAAATTCTGGGGATATATGATACTCTAGTTCCTTTGGAATCTAATCAGATTTTGTCAGAGGCAGAGAAGTGGAAACTAACAATGGACACAGTATCTAGAGGGGATTTGAAAGAGATGCTTTATGCTTGTGCAAAAGCGATGGATGCAAATGATATGGGGACAACTGAATATTTGATGTCTGAGCTACGGAAAGTGATTTCCATTTCAGGCAACCCAATCCAACGAATAGGAGCTTATATGTTGGAATCTCTTGTAGCAAGGATGGCCTGTTCTGGAAGTGCAATCTACAAGGCCTTAAAATGCAAGGAGCCTACTGGTAATGAACTCCTTTCCTACATGCACTTGCTGTATGAAATCTGTCCATACTTCAAGTTTGGGTATCTGTCAGCAAATGGGGCGATTGCTGAAGCCATGAAGGAAGAAAACAGGATCCATATTATTGATTTTCAGATTAACCAGGGCGGCCAGTGGATAAGCCTAATTCAGGCTCTTGCTGGACGACCAGGTGGGCCCCCAGAGCTCAGAATAACTGGTTTTGATGACTCTACCTCGAATTTTGCTCGTGGAGGGGACCTCGATATTGTGGGGAAAAGACTAACAAGACTTGCTGAATCATGTCAGGTTCCCTTTGAGTTCCATGCTGCTGGAGTTGCTCCTTCAAAGGCACAACTCCAAGACCTTAAGCTTCAACCTGGTGAAGCTATTGCTGTAAATTTTGCCATGATGCTGCACCATGTACCGGATGAGAGCGTGGACAGTCACAATCCTCGTGACCGGTTATTGAGATTGGCAAAGCACTTGTGCCCCAAAGTAGTGACTCTTGTGGAGCAGGAATCCAACACCAACCGTGCCTCATTCTTCCCCCGTTTCGCTGAGACACTGAACTATTACTTGCCTATTTTCGAGTCAATTGATGTAGTTCTGCCAAGGGAGCACAAGGAGAGGATCAATGTGGAACAACACTGTCTGGCTCGAGAACTTGTCAACTTAGTAGCATGTGAAGGAGCGGAAAGGGTGGAACGGCATGAGCCTTTGAGGGTGTGGAGGTCGCGCTTTGCTATGGCTGGACTTGAGCCGTATCCATTGAGCTCCTTTGTGAATTCTACCATCAAGAATCTGCTGGAGAAGTACTGTGGAAATTATACTCTAGAAGAGAGAGATGGTGCACTATATCTTGGTTGGATGAATCAACGTCTTGTTGCCTCTTGTGCTTGGAGGTGA 1596 0.4474 METSTKHSYGSGRFYVEHQDYNSSDNTSQATTYSSVQTLEQHYTLESAPITNSFPNHNNSPSTAHFSPNDSPASQLESNSCALMSQHSLEIINGSFENESCLTNDFDDLSLVIREFETAMQGPDTEILGIYDTLVPLESNQILSEAEKWKLTMDTVSRGDLKEMLYACAKAMDANDMGTTEYLMSELRKVISISGNPIQRIGAYMLESLVARMACSGSAIYKALKCKEPTGNELLSYMHLLYEICPYFKFGYLSANGAIAEAMKEENRIHIIDFQINQGGQWISLIQALAGRPGGPPELRITGFDDSTSNFARGGDLDIVGKRLTRLAESCQVPFEFHAAGVAPSKAQLQDLKLQPGEAIAVNFAMMLHHVPDESVDSHNPRDRLLRLAKHLCPKVVTLVEQESNTNRASFFPRFAETLNYYLPIFESIDVVLPREHKERINVEQHCLARELVNLVACEGAERVERHEPLRVWRSRFAMAGLEPYPLSSFVNSTIKNLLEKYCGNYTLEERDGALYLGWMNQRLVASCAWR 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1739 531 ProSiteProfiles GRAS family profile. 152 531 IPR005202 -
Alju08g1739 531 MobiDBLite consensus disorder prediction 49 78 - -
Alju08g1739 531 Pfam GRAS domain family 161 531 IPR005202 -
Alju08g1739 531 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 97 526 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1739 Alju-ChrAlju08 14795976 14797571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1739 1 531 GRAS Transcription Factor Family AT1G50600 56.449 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju08g1739 GRAS 7.8e-128 CL0063