Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1736 ATGGCTACCATTTCCACTTTCTACCCTTACAATCCCGTTCGACCCGCTTCTTCTTCTTCCTCTTTGTCTTCGAATTTGCGCAACTGGCATTCGGTCTCAAAATCAGCTCGTGCAAGAGGAGCTCACAAGTTCGTGGTGCTTGCGGCGCATTCCAACCCTAAAATTATCAAGAATAATCGGAAATCGAGGTTCGGAGAGGTCCTATCTCCGTATGACAGCGATGCAGATGATGAAGCATTGGAGGACGAGGACGAGGGCGAGGATGATGATCCTGTGTCAGATGATTGGCTATCTGATGAAGAATTTGCTGAGCCTTCTGACTTTGATTTTAATGACAAGAAATTTAAGTCAGAGAAAATAAAAGTAAAAGGTAGGCAAAAGGAAAAAGGGTGGGATGCGAGGTTATGTGAAAGCCCTAAAATGTTAAAAAGTGAGAAAGTGGTATCCTTTGAACCAAATAGCTGTGTAAAGGTTGGTAGAAATTTAAAGGAGAACAGATATCCTCGATTGTCTGAAGAGATAAATTTGGATAAGAAATGGATTCCACTTCTGGACTACTTAAGCACATTTGGAATGAAGGAATCGCACTTTATCCAAATCTATGAAAGACACATATCCTCACTTCAAATTAATGTGTGTTCTGCACAGGAAAGATTGGAATACTTAATGAGTGTTGGTGTCAAACATAGAGATGTAAGAAGAATCATTTTGAGACAGCCACAAATTCTGGAGTATACAGTTGAAAACAATTTAAAGGCTCATGTTGCATTTTTGATGGGTTTGGGAATACCAAATTCCAGAATAGGGCAAATCATTGCTGCCGCTCCATCCCTGTTTTCTTATAGTGTTGAAAATTCTTTAAAACCAACAGTGAGATATTTAGTTGAGGAACTAGGCATCAAGGAGAAGGACCTGAGTAAAGTCATTCAGCTGAGCCCACAAATTCTCGTTCAGCGTATTGACATTACCTGGAATATTCGGTATATGTTTCTAGCTAAAGAGTTGGGAGCACCCAGAGATAGCATAGTGAAGATGGTGACCAAACATCCTCAGCTTCTCCATTATAGCATAGATGATGGATTACTGCCTAGGATTAACTTTCTGAGGAGTATAGGAATGAGAAATTCAGACATCTTAAAAGTCTTGACCAGTCTTACACAGGTCCTTTCCCTGTCCCTGGAGGAGAATCTAAAGCCCAAGTACTTGTATCTGGTAAATGAACTTCAGAATGAGGTTCAATCCTTGACCAAATATCCAATGTACCTTAGCTTGTCCTTGGACCAGAGAATACGTCCTCGTCATAGGTTCTTGGTTTCTCTGAAGAAAGCTCCAAAAGGACCATTCCCACTTGGATCACTAGTCCCAACTGATGAATGCTTTTGTCAGCAGTGGGCAGGGACTAGTTTGGATAAGTATTTGGCTTTTCGGCAGAGGCTTTTACTCAAGAAATTTGCTGAAAAGTATGGAAAATCAAAATAA 1479 0.4057 MATISTFYPYNPVRPASSSSSLSSNLRNWHSVSKSARARGAHKFVVLAAHSNPKIIKNNRKSRFGEVLSPYDSDADDEALEDEDEGEDDDPVSDDWLSDEEFAEPSDFDFNDKKFKSEKIKVKGRQKEKGWDARLCESPKMLKSEKVVSFEPNSCVKVGRNLKENRYPRLSEEINLDKKWIPLLDYLSTFGMKESHFIQIYERHISSLQINVCSAQERLEYLMSVGVKHRDVRRIILRQPQILEYTVENNLKAHVAFLMGLGIPNSRIGQIIAAAPSLFSYSVENSLKPTVRYLVEELGIKEKDLSKVIQLSPQILVQRIDITWNIRYMFLAKELGAPRDSIVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMRNSDILKVLTSLTQVLSLSLEENLKPKYLYLVNELQNEVQSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLGSLVPTDECFCQQWAGTSLDKYLAFRQRLLLKKFAEKYGKSK 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1736 492 SMART mt_12 343 374 IPR003690 GO:0003690|GO:0006355
Alju08g1736 492 SMART mt_12 233 264 IPR003690 GO:0003690|GO:0006355
Alju08g1736 492 SMART mt_12 379 411 IPR003690 GO:0003690|GO:0006355
Alju08g1736 492 SMART mt_12 412 443 IPR003690 GO:0003690|GO:0006355
Alju08g1736 492 SMART mt_12 269 301 IPR003690 GO:0003690|GO:0006355
Alju08g1736 492 SMART mt_12 306 338 IPR003690 GO:0003690|GO:0006355
Alju08g1736 492 FunFam Transcription termination factor MTERF9, chloroplastic 244 479 - -
Alju08g1736 492 MobiDBLite consensus disorder prediction 71 96 - -
Alju08g1736 492 MobiDBLite consensus disorder prediction 67 96 - -
Alju08g1736 492 Pfam mTERF 174 439 IPR003690 GO:0003690|GO:0006355
Alju08g1736 492 PANTHER CGI-12 PROTEIN-RELATED 186 463 IPR003690 GO:0003690|GO:0006355
Alju08g1736 492 MobiDBLite consensus disorder prediction 1 25 - -
Alju08g1736 492 Gene3D Transcription termination factor 3, mitochondrial 242 479 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Alju08g1736 mTERF 3.7e-43 No_clan