Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1718 ATGGCCACAAATGATCGCCGTTTTGTAGAATGGAAGGAGCAGTTTATTTCACAGGAGCGTGGCAATCGAGTAGTCCACTATTACCTGAAGGATTCTGCTGGGGATTCCATACTTGCAGTTGTGGGCACTGAGAGGAGCCTGAGACACATGTTCTATGTTGTTGCTGATGAGTTTCTTGAAGTTTGTGGGAAGGAAGGTGCCATCCATGCTGGTTTCAAATGGAGGTCCAGAAGAGAGGTGGTCGATTGGTTGACATCAATGCTATCAAAGCAGCATCAGCTGGGAGACAAGAGTGTGTTGCCAAGTCATAACTTGACACAAGCTCATGAGACCACAAATAGAAGTCTCAAAGAATTTATTGATCTGCATACACAGATATCAGATAAGGGCCTTCTGATGAGCAGCTTCAAAGGACACAATTCTGACATTGTTTGGTCAGGTGTTGCCTGGACATGTGGCAAACAGCTTAAACATTATCCTGCTTTTTACAGGAATGGGATCAAAATAGCAATTCAGTCTTTCGTTTTTGTCATGGCAACTGGAGAAAATCATTATATTGCATATTTGGAGGACATGTATGAAGACAGGAGGGGTCAGAAAAAGGTTAAAGTGAGGTGGTTTCACCATAATCAGGAAGTCAAGGGTATGATTCCCGTGAAAAATACTCACCCTCAAGAAGTTTTTATCACATCTTATTCTCAAGTAATCAGTGCTGAGTGTGTTGATGGCCCGGCCACAGTCTTAACTAAGGAACATTATGAAAAACTCTTGCCTGCCTTTTCGCCTGCCTCATCAAATAGAATCCACATGTGCTTTAGGCAATTCAGAAGCAACAAAGTGAAGGCATTTGACTTGAGTAAATTGCGTGGCTACCATGATCAACCTGTTCTTTCTTGCTTGAACCTTGATTCCTTCCGAAACTCGAAATGTAATAACCTTGCTGAAGAAGATGAAGAGTTGAGCCTAGGTGATGATGTAAGGCCTGAAGGTAAGAGAAGCAAAAGAGGTAGAGGGTCTTCTCAGCATTTGATAGATCACCAGGGAGTTAGGAAATTAAGTAGAAGTCAACAAATGATGGTGGACAAAACCGTAAAAAATGTAGATTATTCTAGGCCAGGTAGGAGATTGCTTTCGCGGAAACAGGTTGATTATCAGCCTTGGTATAGCTCCAAATACAAGGTTGATGACAAGATAGAGTTACTCTGTCAAGATAGTGGCATCAGAGGCTGCTGGTTCAGGTGTACAGTTGTGCAAGTATCTCGGAAACAGATAAAAGTCCAATACGTTGATGTGCAGGATGAAGATGGAGGCGGCAATCTTGAGGAATGGATCCCTGCTTTCAAACTTGCCATGCCGGATAAACTTGGGATGAGACATTCTGGCCGGCCCACCATCAGGCCGGCCCCAACTAATGAGGGGCAACAAGAACTGGCTGTGGGGATCGGAACTGCAATAGATGCATGGTGGAGTGATGGTTGGTGGGAGGGGGTTGTGAGTGGAATTGATGATGGTGATGATGATAATGTGCATGTTTACTTTCCCGGTGAAGGTCTGTTAAAGAAAGTATGCAAGAAGGATCTAAGAGTATCAAGAGATTGGGTGGGGGACCGATGGGTTGATATTGAGCGAAAGCCTAATGTAGCCTCTACTATATTTGCATTTAATAGCTCTAACAACACAAAGTTTTCTGCGACCCCATCTACCACCAAAGATGCCGACTCTTCTGGGGTTGTTATTTCATGTCAAGATGTTCCTGTTAGTGAGAAGTCTAATAATGAACAAAATGATGTTGCTGAAGACATGAACATGGTTATTGATAACAAGCCCCCGTCACAAGAAGAGACAAGTACTGAAGTTGTTGAGACTGAGCAACATGGAAGTTGCGATAACAAAGATAACCATGATGACGGCAAGGATAATAAGGTAGAGAATGACGGCGATTATAACAAAAGTGTCGATAATGTTGTGAGGGATATGGAGGTGTGTGGGACTTCTGGGGAGGGCTCTAAAGCTGTGGCACCCATGGAAGTGGCTGTTTAA 2040 0.4348 MATNDRRFVEWKEQFISQERGNRVVHYYLKDSAGDSILAVVGTERSLRHMFYVVADEFLEVCGKEGAIHAGFKWRSRREVVDWLTSMLSKQHQLGDKSVLPSHNLTQAHETTNRSLKEFIDLHTQISDKGLLMSSFKGHNSDIVWSGVAWTCGKQLKHYPAFYRNGIKIAIQSFVFVMATGENHYIAYLEDMYEDRRGQKKVKVRWFHHNQEVKGMIPVKNTHPQEVFITSYSQVISAECVDGPATVLTKEHYEKLLPAFSPASSNRIHMCFRQFRSNKVKAFDLSKLRGYHDQPVLSCLNLDSFRNSKCNNLAEEDEELSLGDDVRPEGKRSKRGRGSSQHLIDHQGVRKLSRSQQMMVDKTVKNVDYSRPGRRLLSRKQVDYQPWYSSKYKVDDKIELLCQDSGIRGCWFRCTVVQVSRKQIKVQYVDVQDEDGGGNLEEWIPAFKLAMPDKLGMRHSGRPTIRPAPTNEGQQELAVGIGTAIDAWWSDGWWEGVVSGIDDGDDDNVHVYFPGEGLLKKVCKKDLRVSRDWVGDRWVDIERKPNVASTIFAFNSSNNTKFSATPSTTKDADSSGVVISCQDVPVSEKSNNEQNDVAEDMNMVIDNKPPSQEETSTEVVETEQHGSCDNKDNHDDGKDNKVENDGDYNKSVDNVVRDMEVCGTSGEGSKAVAPMEVAV 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1718 679 MobiDBLite consensus disorder prediction 324 341 - -
Alju08g1718 679 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 391 615 - -
Alju08g1718 679 Pfam BAH domain 170 258 IPR001025 GO:0003682
Alju08g1718 679 MobiDBLite consensus disorder prediction 618 653 - -
Alju08g1718 679 Pfam Agenet domain 395 469 IPR008395 -
Alju08g1718 679 ProSiteProfiles BAH domain profile. 167 286 IPR001025 GO:0003682
Alju08g1718 679 MobiDBLite consensus disorder prediction 558 598 - -
Alju08g1718 679 CDD Tudor_Agenet_AtDUF_rpt1_3 392 469 - -
Alju08g1718 679 Gene3D - 136 300 IPR043151 -
Alju08g1718 679 MobiDBLite consensus disorder prediction 558 653 - -
Alju08g1718 679 SMART BAH_4 167 287 IPR001025 GO:0003682
Alju08g1718 679 MobiDBLite consensus disorder prediction 321 344 - -
Alju08g1718 679 SMART agenet_At_2 477 535 IPR014002 -
Alju08g1718 679 SMART agenet_At_2 390 455 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1718 Alju-ChrAlju08 14405002 14408550 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1718 404 533 PHD Transcription Factor Family AT5G58610 27.068 1.69e-10 62.4