Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1717 ATGGGATTATCTAAAGTTTCAATCTTGGTTTTCTGGGCTTGTGTTCAGTTGAATTTAGCCCAAGTTCTCTCATCCTTCAACCAAAACCAAGTCAGTAATTACATTAGCTGGAAAGATTTGTGGGTTGATGAACAGAGATTCCCCTGGGACCCCATTTCAGGTGATCGAGTTATTGTCGTTGACCAGCATGGCAGAGGACATTCTAGGACTGTACAAGGAGCAGTAGATATGGTTCCTGATAACAACTCAGAAAGAATTAAAATTTACATATGCCCAGGAATTTACAGAGAGAAAGTGTATGTGCCAAGAACGAAGGGGTATGTGTCGATGATAGGAGGACGAAATGGAAGAGAGAGTGCAGTGATTACGTGGAACAGCAAATCATCGGACACAGGTTTTGATGGACAAGAACTTGGGACCTATGATTCTGCAACTGTAACTGTAGAATCTGACTATTTCTGTGCAACCAGGCTCACCTTTGAGAATTCGGTAGAGGCGGTGAACGGAGGAGATGGGATGCAAGGAGTGGCACTGAGGGTGGACAGTGAAAGGGCCATGTTTTATAGGGTGAGGATCAAAGGGGAACAAGACACACTGTTGGACAACACAGGAACTCATTATTTCTATCAGTGTCAAATCCAAGGCAAAATTGATTTCATATTTGGCAATGCAAAATCACTCTATCAGAACTGTGATCTTCATTCAGTAGCAGAGACATATGGAGCAATAGCAGCACATCACAGGGATGCAGAAAATGAAGATACAGGCTTCTCTTTTGTAAATTGCTCTATTACAGGCACTGGCAGCGTGTACCTTGGCAGAGCCTGGGGTGACTATTCCAGAATCATCTACTCTCTCTGCTATATGGATGATATCATCATCCCTGAAGGCTGGACTGACTGGAACCACACTTCTAGACAAATGACTGCTGTGTTTGGGGAGTACCAGTGTGAGGGAATTGGAGCAGATAGGAGGAGGAGGGTGAAATGGTCAAAATCTTTGAGCTATGAGGAAGCAAGGCCTTTTCTGGATAGGAGTTTCATAAAGGGGGACCAGTGGCTTAATCTATAG 1071 0.4388 MGLSKVSILVFWACVQLNLAQVLSSFNQNQVSNYISWKDLWVDEQRFPWDPISGDRVIVVDQHGRGHSRTVQGAVDMVPDNNSERIKIYICPGIYREKVYVPRTKGYVSMIGGRNGRESAVITWNSKSSDTGFDGQELGTYDSATVTVESDYFCATRLTFENSVEAVNGGDGMQGVALRVDSERAMFYRVRIKGEQDTLLDNTGTHYFYQCQIQGKIDFIFGNAKSLYQNCDLHSVAETYGAIAAHHRDAENEDTGFSFVNCSITGTGSVYLGRAWGDYSRIIYSLCYMDDIIIPEGWTDWNHTSRQMTAVFGEYQCEGIGADRRRRVKWSKSLSYEEARPFLDRSFIKGDQWLNL 356
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1717 356 FunFam Pectinesterase 53 356 - -
Alju08g1717 356 SUPERFAMILY Pectin lyase-like 56 355 IPR011050 -
Alju08g1717 356 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 54 355 - -
Alju08g1717 356 Gene3D - 56 356 IPR012334 -
Alju08g1717 356 Pfam Pectinesterase 58 351 IPR000070 GO:0030599|GO:0042545
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju08g1717 Alju-ChrAlju08 14402052 14404303 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1717 3 307 Carbohydrate Esterase AT5G55590 56.308 7.25e-129 370