Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1676 ATGGAGGTCGTGTCTTCGCTTCAGCTGGTTCCTCCTACTCTGTGTGCACCCACTCCACCTAAAAGCTCTCTCGAGTGTTTCCTCCTTCTAGTGCTCTTGCTCGTCAAATTTGTAAATGAGGTAGAGAATCATGGGCAAGAAGAGGAAGAAGGAGAAGAAAAAGGTAAGAAATCCTCCTATAGCATGAAGCTACCAACACTTGGACTGTTGTTCCTATCACTCATAGTGGCCATATCCGCGGCAAGGATCGGCCCGGCCGCCTCCTCCATGAAAGGTGTTGGCCGGCCTGATGCAAATTTCATCTCATGGAGAGACTTGATAGTGAGACGAAGCGACATGATGAGGAATAATGGTAGAGTTATCGTAGTTGATCAAAATGGACGTGGAAATTCAACCACAGTTCAAGGAGCCGTTGATTTGGTCCCTGTTAACAACCCATCACGAATCAAAATCATTGTTTATCCTGGAACCTACAATGAATTAGTGGAAGTACCAGCAAGCAAGCCTTTTGTATCAATTATTGGGAGGCCACATACGATAACTGGTGAGTTTCCTGTGATCACGAGTTCTCGAAAAGCTTCTGATAAAGATAAGAAGGGCAACATGTGGGGAAGCATGAGTACTGCCACTGTTCTTGTTCAATCTGACTATTTTGTGATGGCCTCACTTACCATTGAGAATAGTGCGATTCCAAGTGGATATGGAGATGGAAATCAGGCGTTGGCAATAAGAATAGATGGAGATAAATCAGTGTTCTACAGAACCAAGTTCTTAGGGTATCAGGATACTGTTATGGATAATGTTGGGACCCACTTGTTTTATCATTGTTATATTGAAGGAAGCGTTGATTTCATCTGTGGAAGTGCTACTTCATTGTACCAGGGCTGTACATTTTACTCAAAAAGTGGTGGAGCAATAGCTGCACACCAGAGAAATAGTGAGGATAATTCAGGTTTTATCTTTGAGGATTGCAAAATTACAGGGAATGGACCCACCTTTCTTGGGAGAGCTTGGGGCAATTATTCTAGAATTATATATTCTTTTTGCACAATGGACAATATTATCTACCCTGAAGGCTGGAATGATTGGGGCACTTCTTACAAACAAAGCACTGCATTTTTTGGGGAGTACATGAATGAAGGACCTGGAGCAGACACAAGAGGAAGGGCTTTATGGTCAAAAGTAATGTCAGATGGTCAAGCAATAAGATTTGTTGGTAGAAGCTTCATTAATGCAGACCAATGGCTTAAAATATAA 1257 0.424 MEVVSSLQLVPPTLCAPTPPKSSLECFLLLVLLLVKFVNEVENHGQEEEEGEEKGKKSSYSMKLPTLGLLFLSLIVAISAARIGPAASSMKGVGRPDANFISWRDLIVRRSDMMRNNGRVIVVDQNGRGNSTTVQGAVDLVPVNNPSRIKIIVYPGTYNELVEVPASKPFVSIIGRPHTITGEFPVITSSRKASDKDKKGNMWGSMSTATVLVQSDYFVMASLTIENSAIPSGYGDGNQALAIRIDGDKSVFYRTKFLGYQDTVMDNVGTHLFYHCYIEGSVDFICGSATSLYQGCTFYSKSGGAIAAHQRNSEDNSGFIFEDCKITGNGPTFLGRAWGNYSRIIYSFCTMDNIIYPEGWNDWGTSYKQSTAFFGEYMNEGPGADTRGRALWSKVMSDGQAIRFVGRSFINADQWLKI 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1676 418 Pfam Pectinesterase 121 413 IPR000070 GO:0030599|GO:0042545
Alju08g1676 418 Gene3D - 115 418 IPR012334 -
Alju08g1676 418 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 109 417 - -
Alju08g1676 418 SUPERFAMILY Pectin lyase-like 118 417 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1676 Alju-ChrAlju08 13754715 13758346 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1676 99 369 Carbohydrate Esterase AT5G55590 47.811 7.16e-85 261