Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1663 ATGCCTGGAACCTTAAGAAATCCCTCACTTTCTCTCAGATTCTCCTCACTTCTCTCAATAAACTCTCTTTTCTTCTGCTTCTTCTTCTCATGTTGCCATTCCATTGATGAACAAGGCCAAGCTCTTCTTGCATGGAAGAACAGTTTGAACAGTACAGGAGATTCACTATTAGCATCATGGAATCCCTCAGATTCAAGCCCTTGCAAATGGGTTGGTGTTGGCTGCAACTCAAGAGGGGACGTGGAGGAGATAAGCTTGAAATCTGTGGACCTGAAAGGCTCATCATTGCCTTCAAATTTTCAAGCTTTAAAGTCCTTGAAGGTTCTTATCCTGTCTTCAACCAACCTCACAGGTTATATCCCCAGAGAAATTGGAGACTGTAAGGAGCTCGTTTCTATTGATCTCAGTGGGAATTATCTCTCAGGTGAAATACCAGAAGATATTTGCAGGCTGAGTAAACTTCAGAGTTTGTCTCTCCATGCAAACTTTCTTGAAGGTAATATTCCACCCAACATTGGGAATCTCTCTAGTCTTGTGAATTTGACACTCTATGACAACCAGCTCAGTGGTGAAATCCCAAAGAGTTTGGGGAATTTAAGGAGGCTTCAAGTTTTCAGAGTAGGTGGGAATAAGAATCTAAAAGGTGAGCTGCCATGGGAGATTGGAAACTGCACCAGCTTGGTCATGTTAGGCCTTGCAGAAACCAGCATTTCTGGGAGCCTTCCTTCTTCAATAGGAATGCTGAAGAACATTCAAACCATAGCTATTTACACAACTCTCTTGTCAGGCTCAATTCCAAAGGAGATTGGGGATTGCAGTGAGCTGCAGAATTTGTACTTGTATCAGAACTCTATTTCAGGTCCAATCCCAAGTCAACTTGGAAATCTCAGAAAGCTTCAGAGTCTTCTCTTATGGCAGAACAGTCTTGCAGGGACAATACCAGAAGAGCTTGGAAGCTGCACAGAGCTCAAAGTCATAGACTTTTCAGTGAATCTCCTCACTGGAAGCATACCAAGGAGCTTTGGGATGCTTTCAAATATTGAAGAAATCCAGCTAAGTGTTAATCAGTTGACAGGTATTATACCTCCCGAGATTACTAATTGCACTTCTCTGACTCAGTTAGAAGTTGACAACAATGCTCTTTCTGGAGAGATTCCTGCTCTTATAGGCAACTTGAAAAGCTTGAATCTGTTCTTTGCATGGCAGAACAAGCTCACTGGGAAAATCCCAGAAAGTCTGTCTCAGTGCCAAGATCTTGAGGCACTTGATCTGTCTTACAACAACCTGATAGGTTCAATACCAAAATCACTTTTTGGGTTGAGGAATCTCACTAAACTCTTGCTTCTTTCCAATGAACTATCAGGCTTTGTTCCTCCTGATATAGGAAACTGCACAAGTCTCTTCAGGTTAAGGTTGAACAGAAACAGATTCTCTGGGTCAATTCCACCTGAGATAGGAAACTTGAGAAACCTCAACTTTATGGATATGAGCAGCAATCACTTTGTGGGGAAGATTCCTTCAACATTATCTGAATGTGACAGTCTTCAGTTTATTGACCTTCATTCAAATTCTCTCACAGGTTCAATCCCGGAGTCTCTTCCTAGAAGTCTTCGATTAATGGATTTCTCAGATAACAGGCTCACTGGTTCACTGACTCGTGCCAATATCGGTTCATTAAGTGAACTAACCAAACTCAATCTGGGAAAGAATCAACTCAGAGGGAAAATCCCAGAAGAGATTTCATCTTGCTCTAAGCTTCAACTTCTTGACCTGGGAAGAAATGAGTTCTCTGGAGAAATTCCAAAACAATTGGGTCAAATCCCGTCATTGGAAATCTCTTTAAATCTCAGCTTCAATCAATTTTCTGGCGAAATCCCATCTCAAATTTCTGGTCTCACAAAACTGGGTGTTCTTGATATCTCCCACAACAACCTCTCAGGAGATCTAAACTCTCTCTCTGACCTTCAAAACCTCGTTTCCTTAAACGTCTCCTACAACTACTTCTCTGGTAAATTACCCGACACCCCATTTTTCAAAAAGCTTCCTTTAAGTGACCTCACCTCAAATAAAGGCCTCTACATCTCCGGCGCCGATGGTTTGACTCCGGTTGACGGAGTGGGGCCCAGTAAAGTCCATGCCAGATCAGCAATGAGGTTCATCATGTCCATTCTCTTAAGCATAAGTGCAATACTCATACTGCTCACAATCTATGCCTTGGTACGTTCTCACATTCAAAACAGAGCAATCATGGAAGATAATAGCTCATGGGAGATGACTTTTTATCAGAAGCTCGAAATCTCCTCCATTGATGACGTCATCAAGAGCCTGACGTCATCCAACGTGATCGGCACCGGAAGCTCCGGCGTGGTGTACAGGGTAACAATCCCCAACAGCTCAATCGGCGAACTAGCCGTTAAAAAGATGTGGTCTTTAGAAGAATCCGGAGCATTCGAATCCGAGATCCGAACTCTGGGTTCGATCCGACACAAGAACATCGTTAGACTTCTAGGTTGGGGATCCAACAGGAACCTCAAGCTTTTGTTCTACGACTACCTCCCTAACGGCAGCCTCAGCTCGATGCTTCATGGCTCCGGCAAGGGAGGGGCAGATTGGGAAACAAGGTACGAGGTTGTGGTGGGTGTGGCTCACGCGCTTGCTTATTTACACCACGATTGTGTCCCTCCAATACTGCACGGAGACGTCAAGGCCATGAACGTGTTATTGGATGACAGGTTTCAGGCTTATCTCGCAGATTTTGGTTTAGCCAGAATTGTTTGTGACAAAAACGAAGCTCATGATCATCGTTCTGATCCTAAACCACTTCATAAAACGTATTTGGCTGGTTCTTACGGATACATGGCTCCAGAACATGCATCAATGCAGAGAATCACAGAGAAGAGCGATGTGTACAGTTATGGAGTGGTTCTTTTGGAGGTATTGACAGGGAGGCACCCACTAGACCCAACTCTACCAGGTGGTGCACACATGGTTCAGTGGGTTCGGAACCACTTAGCCAATAAAGTTGACCCATCTGATATTCTGGACTCAAATCTCAGAGGCAGGGCTGACCCAGCCATGCACGAGATGCTTCAAACTCTGGCCGTATCATTCCTGTGTGTGAGCACTAAGCCTGAGGATCGTCCTACAATGAAGGACGTTGTGGCTATGCTCAAAGAAATCAGACCTGTTGAGTCCTCAAGGTTGGATTCTGATGAACTCAAGAAGAAGGCTAAGTCTTCATTACACGCCTCCCCTTATCCCCTTCCGCCACCTAAGCACCTCCTCTCCCATCAATCTTCTAATTGTTCCTTTCATTTCTCAGATGACTCAGTCTAA 3336 0.4412 MPGTLRNPSLSLRFSSLLSINSLFFCFFFSCCHSIDEQGQALLAWKNSLNSTGDSLLASWNPSDSSPCKWVGVGCNSRGDVEEISLKSVDLKGSSLPSNFQALKSLKVLILSSTNLTGYIPREIGDCKELVSIDLSGNYLSGEIPEDICRLSKLQSLSLHANFLEGNIPPNIGNLSSLVNLTLYDNQLSGEIPKSLGNLRRLQVFRVGGNKNLKGELPWEIGNCTSLVMLGLAETSISGSLPSSIGMLKNIQTIAIYTTLLSGSIPKEIGDCSELQNLYLYQNSISGPIPSQLGNLRKLQSLLLWQNSLAGTIPEELGSCTELKVIDFSVNLLTGSIPRSFGMLSNIEEIQLSVNQLTGIIPPEITNCTSLTQLEVDNNALSGEIPALIGNLKSLNLFFAWQNKLTGKIPESLSQCQDLEALDLSYNNLIGSIPKSLFGLRNLTKLLLLSNELSGFVPPDIGNCTSLFRLRLNRNRFSGSIPPEIGNLRNLNFMDMSSNHFVGKIPSTLSECDSLQFIDLHSNSLTGSIPESLPRSLRLMDFSDNRLTGSLTRANIGSLSELTKLNLGKNQLRGKIPEEISSCSKLQLLDLGRNEFSGEIPKQLGQIPSLEISLNLSFNQFSGEIPSQISGLTKLGVLDISHNNLSGDLNSLSDLQNLVSLNVSYNYFSGKLPDTPFFKKLPLSDLTSNKGLYISGADGLTPVDGVGPSKVHARSAMRFIMSILLSISAILILLTIYALVRSHIQNRAIMEDNSSWEMTFYQKLEISSIDDVIKSLTSSNVIGTGSSGVVYRVTIPNSSIGELAVKKMWSLEESGAFESEIRTLGSIRHKNIVRLLGWGSNRNLKLLFYDYLPNGSLSSMLHGSGKGGADWETRYEVVVGVAHALAYLHHDCVPPILHGDVKAMNVLLDDRFQAYLADFGLARIVCDKNEAHDHRSDPKPLHKTYLAGSYGYMAPEHASMQRITEKSDVYSYGVVLLEVLTGRHPLDPTLPGGAHMVQWVRNHLANKVDPSDILDSNLRGRADPAMHEMLQTLAVSFLCVSTKPEDRPTMKDVVAMLKEIRPVESSRLDSDELKKKAKSSLHASPYPLPPPKHLLSHQSSNCSFHFSDDSV 1111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1663 1111 ProSiteProfiles Leucine-rich repeat profile. 634 656 IPR001611 GO:0005515
Alju08g1663 1111 FunFam Leucine-rich receptor-like protein kinase family protein 339 612 - -
Alju08g1663 1111 MobiDBLite consensus disorder prediction 1065 1111 - -
Alju08g1663 1111 Gene3D Ribonuclease Inhibitor 432 533 IPR032675 -
Alju08g1663 1111 Gene3D Ribonuclease Inhibitor 613 697 IPR032675 -
Alju08g1663 1111 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 852 1075 - -
Alju08g1663 1111 SUPERFAMILY Protein kinase-like (PK-like) 759 1057 IPR011009 -
Alju08g1663 1111 SUPERFAMILY RNI-like 83 396 - -
Alju08g1663 1111 Gene3D Ribonuclease Inhibitor 534 612 IPR032675 -
Alju08g1663 1111 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 211 336 - -
Alju08g1663 1111 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Alju08g1663 1111 FunFam Putative LRR receptor-like serine/threonine-protein kinase 613 698 - -
Alju08g1663 1111 Pfam Protein tyrosine and serine/threonine kinase 778 1057 IPR001245 GO:0004672|GO:0006468
Alju08g1663 1111 Gene3D Transferase(Phosphotransferase) domain 1 852 1082 - -
Alju08g1663 1111 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 503 1058 - -
Alju08g1663 1111 MobiDBLite consensus disorder prediction 1094 1111 - -
Alju08g1663 1111 FunFam Putative LRR receptor-like serine/threonine-protein kinase 760 851 - -
Alju08g1663 1111 FunFam Leucine-rich receptor-like protein kinase family protein 35 198 - -
Alju08g1663 1111 SUPERFAMILY L domain-like 403 676 - -
Alju08g1663 1111 ProSitePatterns Serine/Threonine protein kinases active-site signature. 896 908 IPR008271 GO:0004672|GO:0006468
Alju08g1663 1111 ProSiteProfiles Protein kinase domain profile. 776 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1663 1111 SMART serkin_6 776 1057 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1663 1111 ProSitePatterns Protein kinases ATP-binding region signature. 782 807 IPR017441 GO:0005524
Alju08g1663 1111 Gene3D Ribonuclease Inhibitor 32 211 IPR032675 -
Alju08g1663 1111 MobiDBLite consensus disorder prediction 1065 1079 - -
Alju08g1663 1111 SMART LRR_typ_2 103 127 IPR003591 -
Alju08g1663 1111 SMART LRR_typ_2 151 174 IPR003591 -
Alju08g1663 1111 SMART LRR_typ_2 488 512 IPR003591 -
Alju08g1663 1111 SMART LRR_typ_2 175 199 IPR003591 -
Alju08g1663 1111 SMART LRR_typ_2 344 368 IPR003591 -
Alju08g1663 1111 SMART LRR_typ_2 296 320 IPR003591 -
Alju08g1663 1111 SMART LRR_typ_2 559 583 IPR003591 -
Alju08g1663 1111 SMART LRR_typ_2 440 464 IPR003591 -
Alju08g1663 1111 SMART LRR_typ_2 632 655 IPR003591 -
Alju08g1663 1111 Pfam Leucine rich repeat N-terminal domain 36 76 IPR013210 -
Alju08g1663 1111 Gene3D Phosphorylase Kinase; domain 1 739 851 - -
Alju08g1663 1111 Gene3D Ribonuclease Inhibitor 212 431 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1663 Alju-ChrAlju08 13641974 13645735 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1663 32 1111 Receptor kinase-like Gene Family AT5G56040 65.928 0.0 1402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju08g1663 PK_Tyr_Ser-Thr 1.9e-36 CL0016