Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1648 ATGAGCGATTCTGCTTACAGAGTTGAAACCACTTCGCGTCTTGCCCAATGGAGAATCGAAAACCCTGCTTCCTGCACTTATCGAAAATCTGATCCTTTCAGGATCGGCAAGTGGAATTGGCATTTGGCCGTGGAGAAGAACAGGGTTTTATTTATAAAACTATATCCAGAAATATCAAATCTAACCAGAGACAACCCGCCGATTGCATCTTTCATCATCCGGGTCGTTAGTTCTGCTTCGGATCGCAAGGCCTTGACCCATCCAGTAGTAAAAGACAGATTGATCAAGAACAGCGAAGACTTTGTTTGGCCACTTGAGGTTCCAGTAACTGGGAAATTCATTATTGACGTCGAGTTCCTTGATTTGAAGACTGCATCCCCAAACGGTGGAGAACCTTGCTCCATCTGGGCCATAGGACCTACGCCGAAGGCATCCAATGCAACAGCTCTTGAAGCTCTTAATCGGATGCTAACTGAAGGAATCCACACAGACATAGTGATCAATGCATCTGATGGAAGCATTGGAGCTCATCGCGCTGTTCTTGCTGCTCGATCTCCTGTCTTTCACAGCATGTTCTCGCATAACCTTAAGGAGAAGGAGCTATCAACCATAAACATTGAAGATATGTCCATTGATGCTTGCCAAGCATTCCTCAATTATCTTTATGGTAGCATAAAAACTGAAGAATTTCTCACACACAGGCTTGTCCTCCTTCATGCTGCTGACAAGTATGACATATCTGACCTGAAAGAGGCATGCCATGAAAGCCTTATAGAAGATATTGATACTAAAAATGTTCTTGAGAGGCTTCAAAATGCATCCCTGTACCAGTTGCCAAAACTGAAGAGTAGCTGTTTACGGTATCTCATAAAATTTGGGAAACTATTTGACGTTCGCGAGGATTTCAACTCCTTCCTGCAGTGTGCAGATAGGGATCTGATTACTGAAGTCTTCCATGAAGTTCTAAATGCCTGGAGAGGGTTCTGA 987 0.4377 MSDSAYRVETTSRLAQWRIENPASCTYRKSDPFRIGKWNWHLAVEKNRVLFIKLYPEISNLTRDNPPIASFIIRVVSSASDRKALTHPVVKDRLIKNSEDFVWPLEVPVTGKFIIDVEFLDLKTASPNGGEPCSIWAIGPTPKASNATALEALNRMLTEGIHTDIVINASDGSIGAHRAVLAARSPVFHSMFSHNLKEKELSTINIEDMSIDACQAFLNYLYGSIKTEEFLTHRLVLLHAADKYDISDLKEACHESLIEDIDTKNVLERLQNASLYQLPKLKSSCLRYLIKFGKLFDVREDFNSFLQCADRDLITEVFHEVLNAWRGF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1648 328 SMART BTB_4 163 261 IPR000210 GO:0005515
Alju08g1648 328 ProSiteProfiles BTB domain profile. 163 222 IPR000210 GO:0005515
Alju08g1648 328 CDD BTB_POZ_ZBTB_KLHL-like 162 244 - -
Alju08g1648 328 Gene3D Potassium Channel Kv1.1; Chain A 140 290 IPR011333 -
Alju08g1648 328 SUPERFAMILY POZ domain 148 259 IPR011333 -
Alju08g1648 328 Pfam BTB/POZ domain 153 259 IPR000210 GO:0005515
Alju08g1648 328 PANTHER OS08G0495500 PROTEIN-RELATED 5 327 IPR044714 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1648 Alju-ChrAlju08 13348912 13350687 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Alju08g1648 BTB 6.2e-24 CL0033
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g1648 08 13348912 13350687 Alju07g0726 07 11508741 11512780 CCT
Alju08g1648 08 13348912 13350687 Alju08g1648 08 13348912 13350687 ECH