Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1640 ATGGCTGGAACCCTAAATCTTCCGCTCGCCGCTTTCAGTTTTGTCCGTTCCTCTTCTTCAAACGGTGCTGCCACTTCCTCCGTCAGGTTTCTTCCGCATCAATGTAGGGCTTCGATGCGATCTTTTGCGACTGAGACCGGATCTGCGGCGGTCGCATCTCGGCGCCCGGCGAGCCTCTATGAGGTGCTTCGAGTAAGCCAGAACGCTTCGCCTAGGGAGATCAAGTCGGCCTACCGGAGTTTGGCTAAGATCTACCATCCGGATTCGGCGCTGCACCGATCGGAGTCTGAGGACGACCAGGACTTCATCGAGATCCACAACGCTTACGCCACGCTCTCTGATCCTTCGGCCAGAGCGATCTACGATCTTTCTTTGATGGCTTTTCATGGAAGGAGAAGCCAGGTGTCGCTATCTTCGATTCAGAATTCCACTTCTGGGTTTTATACGACCCGCAGATGGGAAACGGATCAATGCTGGTAG 480 0.5437 MAGTLNLPLAAFSFVRSSSSNGAATSSVRFLPHQCRASMRSFATETGSAAVASRRPASLYEVLRVSQNASPREIKSAYRSLAKIYHPDSALHRSESEDDQDFIEIHNAYATLSDPSARAIYDLSLMAFHGRRSQVSLSSIQNSTSGFYTTRRWETDQCW 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1640 159 PRINTS DnaJ domain signature 97 117 IPR001623 -
Alju08g1640 159 PRINTS DnaJ domain signature 78 93 IPR001623 -
Alju08g1640 159 PRINTS DnaJ domain signature 60 78 IPR001623 -
Alju08g1640 159 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 4 159 - -
Alju08g1640 159 SUPERFAMILY Chaperone J-domain 58 148 IPR036869 -
Alju08g1640 159 CDD DnaJ 60 114 IPR001623 -
Alju08g1640 159 ProSitePatterns Nt-dnaJ domain signature. 102 121 IPR018253 -
Alju08g1640 159 Gene3D DnaJ domain 43 145 IPR036869 -
Alju08g1640 159 ProSiteProfiles dnaJ domain profile. 58 125 IPR001623 -
Alju08g1640 159 Pfam DnaJ domain 59 122 IPR001623 -
Alju08g1640 159 SMART dnaj_3 57 117 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1640 Alju-ChrAlju08 13281061 13281540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1640 60 122 C2H2 Transcription Factor Family AT1G74250 48.485 1.35e-10 57.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g1640 08 13281061 13281540 Alju08g1640 08 13281061 13281540 ECH