Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1634 ATGAGTATTATTTGTGCAATCTTTTTGACATATCATTTTCTTCATAATATAATATTAGAAATAAATAAATTTGGTACAGTAGAGAGAGATATGGGTCGTATTCCATGCTGTGAGAAGGACAACGTTAAAAGAGGACAGTGGACACCTGAGGAAGACAACAAGCTCTCCTCCTACATTGCCCAACATGGTACCAGGAATTGGCGCCTCATTCCTAAGAATGCTGGCCTCCAGAGGTGTGGTAAGAGCTGCAGGCTAAGGTGGACTAACTACCTTCGTCCTGATCTCAAGCATGGTCACTTTTCTGACGCTGAAGAGCAAACCATTGTCAAGCTTCACTCCGTTTTTGGTAACCGATGGTCACTAATAGCAGCTCAGTTGCCAGGCCGCACCGACAATGACGTCAAAAACCACTGGAACACCAAGCTGAAAAAGAAGCTTTCAGGTATGGGGATTGACCCAGTCACCCACAAGCCATTCTCCCACCTGATGGCTGAAATTGCAACAACATTGGCACCCCCACAGGCAGCTCACCTAGCTGAAGCAGCTCTGGGCTGCTTCAAAGATGAGGTGCTTCATCTTCTTACCAAGAAGAAGATTAACTTCCAGGCTCAACACAACACTGATCAAATGGGGAATAACAACATTACCTCTTTCATGAACTATAAACCTGATGAGAAGGAAGACACTTCTGAAAAGATTAACTACTGCTGCTAG 714 0.444 MSIICAIFLTYHFLHNIILEINKFGTVERDMGRIPCCEKDNVKRGQWTPEEDNKLSSYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNYLRPDLKHGHFSDAEEQTIVKLHSVFGNRWSLIAAQLPGRTDNDVKNHWNTKLKKKLSGMGIDPVTHKPFSHLMAEIATTLAPPQAAHLAEAALGCFKDEVLHLLTKKKINFQAQHNTDQMGNNNITSFMNYKPDEKEDTSEKINYCC 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1634 237 CDD SANT 100 142 IPR001005 -
Alju08g1634 237 PANTHER F14D16.11-RELATED 31 234 - -
Alju08g1634 237 SMART sant 43 93 IPR001005 -
Alju08g1634 237 SMART sant 96 144 IPR001005 -
Alju08g1634 237 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 96 146 IPR017930 -
Alju08g1634 237 ProSiteProfiles Myb-like domain profile. 39 91 IPR001005 -
Alju08g1634 237 FunFam Transcription factor RAX3 37 97 - -
Alju08g1634 237 Pfam Myb-like DNA-binding domain 44 91 IPR001005 -
Alju08g1634 237 Pfam Myb-like DNA-binding domain 98 140 IPR001005 -
Alju08g1634 237 SUPERFAMILY Homeodomain-like 41 138 IPR009057 -
Alju08g1634 237 ProSiteProfiles Myb-like domain profile. 92 142 IPR001005 -
Alju08g1634 237 FunFam transcription factor MYB80 99 159 - -
Alju08g1634 237 Gene3D - 98 158 - -
Alju08g1634 237 CDD SANT 47 91 IPR001005 -
Alju08g1634 237 Gene3D - 44 96 - -
Alju08g1634 237 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 39 95 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1634 Alju-ChrAlju08 13224776 13227475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1634 31 201 MYB Transcription Factor Family AT5G56110 89.474 2.34e-116 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju08g1634 Myb_DNA-binding 1e-15 CL0123