Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju08g1615 | ATGGAGTTAACTCCAAGAGGAAGAACCCAGCACTCTCCTTTGACTTTGAGCTTTGACAGAGATGCAGACTCTGTTTTGGAGCAAGATAGGGAGATTCTCTCGAAGTGGGCTGCCATAGAAAAACTACCCACTTTCAAAAGGATCAGAACTTCGTTTATTGATGTGATTGAAGATGATGCTGTACAAACCAGCAGTAGCAGCGACATCAATTTAAAATCAGAGAGTAGAAGGCAATTGAGGTCAAACAGTAAAAGGGTCGTTGATGTTTCCAAACTTGGAGCACCTGAAAGGCGGTTGTTGATTGACAAGCTTATCAAGCACATTGAGAATGATAATCTCCAGTTACTGCAGAGACTAAGAGAAAGGATAGAGAGAGTGAATGTGAAGATTCCTAATGTGGAGGTCAGGTACAAGAACCTGCATGTAGCAGCAGAATGTGAGGTTGTACAGGGGAAGCCACTTCCTACACTGTGGAACTCTATTATTAGCTTCTTTTCAGGTGTTACGAAGGCAGTGCCTTGTACTTCTCAATGTACCAACATAAGCATTCTTAAGGATGTAAGTGGCATCATAAAGCCATCAAGGCTTACAATTCTTCTTGGCCCACCTGGCAGTGGGAAAACGACCTTGCTAATGGCACTGGCCGGAAAACTTGAGCAATCTCTCAAGGTGACTGGAGAAGTCTCTTACAACGGTCACATTCTAGATGAATTTGTTCCTCAAAAAACATCATCATATATAAGCCAGTATGACCTGCACATACCTGAGATGACAGTGAGGGAAACAATTGACTTTTCAGCCCAATGCCAGGGGGTTGGCGACAGAGTTGATATCCTGGCTGAAGTCACAACCAGAGAAAAAGATGCAGGAATCATCCCCGACCCAGATATTGATGCCTATATGAAGGCAATATCAGTTGAAGGACAAGAAGAAAATCTACAAACTGATTATGTTTTGAAGATTCTTGGGCTTGATATCTGCGCTGACACAATGGTTGGTGATGCATTAGATAGAGGCATTTCAGGTGGACAGAAGAAAAGGCTTACAACAGGAGAGATGATTGTTGGTCCCATAAAAACTCTGTTTATGGATGAAATATCAACTGGCTTGGACAGCTCCACAACTTTTCAAATAATTACCTGTCTCCAGCAGTTGGTGCACATCACAGATGCAACAGCAGTGGTTTCACTTCTTCAGCCAGCTCCTGAAACCTTTGAATTATTTGATGATCTTATACTGATAGCTGAGGGGAAGATTGTATATCATGGCCCATGTGGTCAAGCACTCCAATTTTTTGAGGAATGTGGTTTCAAGTGTCCTGAAAGGAAAGGAGTAGCAGACTTTCTCCAGGAAGTAACCTCTAAGAAGGATCAAGGGCAATACTGGTATCGTACGGACACTCCCTACAACTATGTTTCTGTGGATGAGTTCTCTCAAATTTTCAAAACAAGCTATTGGGGACAAAGTTTAAATGATGAGCTCTCAAAGCCATGTGATAAATCTCAATCCAATAAAAATGATTTATCATTTAGCAAGTACTCCTTGGGCAAATGGAAATTGTTCGTAGCTTGCATGAGGAGGGAGATACTTCTCATGAAACGAAACTATTTTATCTATGTATTCAAAACTGCACAGCTCACAATCACAGCAATCATTACAATGACAGTATTTATACGCACTCAGTTGAATGTAGACATAAAGAGTGCAAACTTTTTACTGGGCTCATTGTATTACACACTTGTTCGCCTCATGACTAATGGAGTTGCTGAGCTGATCTTGACTCTTACTAGACTTCCTGTTGTTTACAAGCAGAAGGAATTCTATCTATATCCAGCATGGGCTTACTGTCTTCCAGCTTCCATTCTAAAGATCCCATTTTCGGTTATTGATTCAATTGTCTGGACTTCAGTAACTTATTACGTTATAGGCTACAGCCCTGAAGTAGAAAGGTTCTTCCGTCAGTTTCTTCTACTTTTCACTCTGCATATGTCGTCAACATCCTTATGCCGTTTCCTTGCCTCAGTTTTCCAAACTGATGTTGCAGCTACAACAGTCGGTTCCTTGTTCTTAGTACTCATGTTTTTGTTTGGAGGCTTCATTCTTCCTAGACCTTCATTACCATCGTGGTTGAGGTGGGGCTTTTGGCTCTCTCCCATGACATATGGAGAAATTGGATTAACAATAAATGAATTTCTTGCTCCCCGCTGGCAGAAGATTCAAGAGGGAGGCATCTCCATAGGGAGGCAGGTTTTAACTAGTCATGGTTTAGACTTCAATGCAAACTTCTACTGGCTATCAATTGGGGCATTGCTTGGTTTCACAGTACTTTTTGATTTTGGATTTATCTTAGCATTGAGTTACTTAAAACCTCCAAAGATGTCTCGAGCTTTTGTTTCCAAAGCAAAGGCCTCTCAACTACAAGGAGGAGAAAATGGCAGGAGCGTGGAGCTACAAAATAAATCAGTTACAGTTGACATTAGCCAGACCTCAAAGGAAACGCAACAAAACACAGGAAAAATGGTCCTGCCCTTTCAGCCACTGACAGTAGTATTCAAGGATGTCCAGTATTTTGTCGACACCCCTCCAGAAATGAAAAAGCATGGGTCAAATGAGAGAAAACTTCAACTGCTCCGTGATATCACTGGAGCATTTAGGCCTGGAGTTCTCACAGCACTGATGGGAGTGAGTGGAGCAGGGAAAACAACTCTTATGGATGTTCTTTCTGGGAGAAAAACCGGAGGCATCATTGAAGGAGATATAAGAATTGGAGGATACCCCAAAGTGCAGAAGACATTTGCAAGAGTTTCAGGTTACTGTGAGCAGGTTGACATACATTCCCCATATATAACAGTTGAAGAATCTGTTAAATACTCAGCATGGTTGAGGTTACCAATGGAGATTGATTCAGTCACAAAAGGGAAATTTGTAGAAGAAGTCATTGAAACAATTGAACTTGATGATATAAGGGATGGCTTAGTTGGCATAGCTGGCCAAAGTGGTTTATCAACTGAACAGCGTAAAAGACTTACCATTGCAGTGGAGCTTGTTTCCAACCCATCAATAATCTTTATGGATGAACCAACATCAGGTTTGGATGCCCGAGCAGCTGCCATAGTTATGCGTGCAGTGAAGAATGTAGTTGCCACCGGCAGGACCACGGTTTGCACCATACACCAACCAAGCATTGACATATTTGAGACTTTTGATGAGTTGATTCTAATGAAATCAGGAGGACAGATTATCTATAATGGAAAACTCGGTCATCAGTCAAGCAGACTGATTGAATACTTTCAGAGTATACCAGGAGTGCCAAAGATCAAAGACAATTATAATCCTGCAACCTGGATGCTAGAAGCTACCTGTACATCTGTAGAAGCAGAACTTAAAGTAGACTTCGCAAAAATCTATAAGGAGTCACCTCTTCACCGGAACACCCTTGAATTGGTACAAGAGTTAAGTGACCCATCGCCCGGTTCAAAGGACTTGCAATTCTCAACTCGTTTTCCACTAAATTACTTGGGGCAGTTTACAGCATGTCTATGGAAGCAACACTTGTCCTATTGGAGAAGTCCTGAGTACAACTTGACACGTTTTGTGTTCATGGTTGTTGCAGCAGTAATATTTGGGGCAGTATTTTGGCAAAAAGGGAAGGAAATAAACAATGAGCAGGATTTGTTCAACATACTTGGATCAATGTATATTGCTGTAATATTCTTGGGCATAAATAACTGTTCATCAATCTTACCATATGTGGTAACTGAGCGCACTGTCTTGTACCGTGAAAAATTTGCTGGAATGTATTCTTCCATAGCCTACTCATTTGCACAGGTGACCATTGAGATACCCTATATCTTAGTGCAAGCCATTGTATATGTGGCTATCACTTATCCAATGATAGGTTTCTATTGGTCAGTTGAGAAGATCTTTTGGTACTTCTACACCACATTCTGTACATTTTTGTACTTCGTATATCTCGGAATGTTGATAGTTTCGTTGAGCTTGAATCTCGATTTAGCTTCCATACTCTCAACTGCAGTCTACACCATATTCAATCTTTTCTCTGGATTCCTCATGCCAGGACCGAAAATTCCTAAATGGTGGGTTTGGTGTTATTGGCTTTGCCCCACAGCTTGGTCTCTGAATGGCCTCTTGACTTCACAATATGGAGACATCGACACGAAGATAACCGTATTTGGGAACCCAAAACCAGTTGCAGTGGGTGCCTTTCTGAAAGACTATTATGGGTTCCATCACGATCGGTTGAGCATTGTGGCTGTGGTTCTCATTGCTTTCCCAATTGTTTATGCATTTCTATTTGCTTATTGCATAGGGAAATTGAATTTCCAGAAAAGGTAG | 4356 | 0.4137 | MELTPRGRTQHSPLTLSFDRDADSVLEQDREILSKWAAIEKLPTFKRIRTSFIDVIEDDAVQTSSSSDINLKSESRRQLRSNSKRVVDVSKLGAPERRLLIDKLIKHIENDNLQLLQRLRERIERVNVKIPNVEVRYKNLHVAAECEVVQGKPLPTLWNSIISFFSGVTKAVPCTSQCTNISILKDVSGIIKPSRLTILLGPPGSGKTTLLMALAGKLEQSLKVTGEVSYNGHILDEFVPQKTSSYISQYDLHIPEMTVRETIDFSAQCQGVGDRVDILAEVTTREKDAGIIPDPDIDAYMKAISVEGQEENLQTDYVLKILGLDICADTMVGDALDRGISGGQKKRLTTGEMIVGPIKTLFMDEISTGLDSSTTFQIITCLQQLVHITDATAVVSLLQPAPETFELFDDLILIAEGKIVYHGPCGQALQFFEECGFKCPERKGVADFLQEVTSKKDQGQYWYRTDTPYNYVSVDEFSQIFKTSYWGQSLNDELSKPCDKSQSNKNDLSFSKYSLGKWKLFVACMRREILLMKRNYFIYVFKTAQLTITAIITMTVFIRTQLNVDIKSANFLLGSLYYTLVRLMTNGVAELILTLTRLPVVYKQKEFYLYPAWAYCLPASILKIPFSVIDSIVWTSVTYYVIGYSPEVERFFRQFLLLFTLHMSSTSLCRFLASVFQTDVAATTVGSLFLVLMFLFGGFILPRPSLPSWLRWGFWLSPMTYGEIGLTINEFLAPRWQKIQEGGISIGRQVLTSHGLDFNANFYWLSIGALLGFTVLFDFGFILALSYLKPPKMSRAFVSKAKASQLQGGENGRSVELQNKSVTVDISQTSKETQQNTGKMVLPFQPLTVVFKDVQYFVDTPPEMKKHGSNERKLQLLRDITGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGIIEGDIRIGGYPKVQKTFARVSGYCEQVDIHSPYITVEESVKYSAWLRLPMEIDSVTKGKFVEEVIETIELDDIRDGLVGIAGQSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAIVMRAVKNVVATGRTTVCTIHQPSIDIFETFDELILMKSGGQIIYNGKLGHQSSRLIEYFQSIPGVPKIKDNYNPATWMLEATCTSVEAELKVDFAKIYKESPLHRNTLELVQELSDPSPGSKDLQFSTRFPLNYLGQFTACLWKQHLSYWRSPEYNLTRFVFMVVAAVIFGAVFWQKGKEINNEQDLFNILGSMYIAVIFLGINNCSSILPYVVTERTVLYREKFAGMYSSIAYSFAQVTIEIPYILVQAIVYVAITYPMIGFYWSVEKIFWYFYTTFCTFLYFVYLGMLIVSLSLNLDLASILSTAVYTIFNLFSGFLMPGPKIPKWWVWCYWLCPTAWSLNGLLTSQYGDIDTKITVFGNPKPVAVGAFLKDYYGFHHDRLSIVAVVLIAFPIVYAFLFAYCIGKLNFQKR | 1451 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju08g1615 | 1451 | Pfam | ABC transporter | 877 | 1029 | IPR003439 | GO:0005524 | |
| Alju08g1615 | 1451 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 873 | 1085 | IPR027417 | - | |
| Alju08g1615 | 1451 | PANTHER | PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 | 24 | 1451 | - | - | |
| Alju08g1615 | 1451 | FunFam | ABC transporter G family member 34 | 172 | 475 | - | - | |
| Alju08g1615 | 1451 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 163 | 441 | IPR003439 | GO:0005524 | |
| Alju08g1615 | 1451 | Coils | Coil | 116 | 136 | - | - | |
| Alju08g1615 | 1451 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 849 | 1102 | IPR003439 | GO:0005524 | |
| Alju08g1615 | 1451 | Gene3D | - | 165 | 471 | IPR027417 | - | |
| Alju08g1615 | 1451 | SMART | AAA_5 | 886 | 1078 | IPR003593 | GO:0016887 | |
| Alju08g1615 | 1451 | SMART | AAA_5 | 193 | 426 | IPR003593 | GO:0016887 | |
| Alju08g1615 | 1451 | Pfam | ABC transporter | 184 | 366 | IPR003439 | GO:0005524 | |
| Alju08g1615 | 1451 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 179 | 440 | IPR027417 | - | |
| Alju08g1615 | 1451 | Pfam | Plant PDR ABC transporter associated | 736 | 798 | IPR013581 | - | |
| Alju08g1615 | 1451 | CDD | ABCG_PDR_domain2 | 846 | 1084 | IPR034003 | - | |
| Alju08g1615 | 1451 | Pfam | ABC-2 type transporter | 1058 | 1120 | IPR043926 | GO:0140359 | |
| Alju08g1615 | 1451 | Pfam | ABC-2 type transporter | 399 | 451 | IPR043926 | GO:0140359 | |
| Alju08g1615 | 1451 | FunFam | ABC transporter G family member 34 | 863 | 1095 | - | - | |
| Alju08g1615 | 1451 | Gene3D | - | 864 | 1096 | IPR027417 | - | |
| Alju08g1615 | 1451 | Pfam | ABC-transporter N-terminal | 99 | 159 | IPR029481 | - | |
| Alju08g1615 | 1451 | Pfam | ABC-2 type transporter | 520 | 731 | IPR013525 | GO:0016020|GO:0140359 | |
| Alju08g1615 | 1451 | Pfam | ABC-2 type transporter | 1175 | 1387 | IPR013525 | GO:0016020|GO:0140359 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Alju08g1615 | Alju-ChrAlju08 | 12966356 | 12975407 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju08g1615 | 874 | 1061 | Calmodulin-binding Proteins | AT2G36910 | 27.861 | 8.26e-08 | 55.5 |