Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1602 ATGAAGAAGACCCCAGAACGCCATTTTGTTCTTTCAAGCCAAAGGAATCGGAATATAGGCAATGATGATACAAACAAGCACAATCAAAAGACTCGTCCTTCCCTTAAATATTTCAAATCTTTTGTCAAGAAATTCGCAGTTTTAGTTGCAATCTTTCGCTCTGGCAAGAAAAAATCAGCTGCAGAAGTTTCTGGAGGTGCGGTCACAAGGAATAGAAGTAGAGCCAGATTTGTACCATCATTTTCAACTGATGTATCGTCTGAGAGTAACACCAAGAATTCATCATGGAAGTTTTCTAATTCCTACGCATCTTCTAGCACCACAAGTGGACAACTAGGAATGGGGAATTTCTCTTTTGAAGAACTTTACAAGGCAACAGGAAAATTTTCTGCAGATAAAATAATTGGGGAAGGTGGGTTTGGAACTGTCTATATGGGGAAGCTTAATGATGGATCTCTTGTTGCCATAAAGCGCTCCAAGAAGACTGCGCATGACAAGAACTTAGCTGAGTTCAAGAATGAAATAAATACCTTGTCAAGAATTGAGCATCTGAATCTTGTGAGGTTATACGGATATTTGGAGCATGAAGATGAAAAAATGATTGTTGTCGAATATGTTGGCAATGGGACACTTCGAGAACATTTGAACGGTACAAGGGGAAATGGACTCGAAATTGGTGAGCGTCTAGACATTGCAATTGATGTTGCTCATGCAATAACTTACCTTCATATGTACACAGATCGTCCAATAATCCATAGAGACATCAAATCATCCAATATCTTACTCACAGAAAAATTGAGGGCTAAAGTTGCAGACTTTGGATTTGCTCGTTTGGCTTCAGATGATCCTGCAGCAACCCACATCTCAACCCAAATAAAAGGAACAGCTGGCTACTTGGATCCTGAGTATCTCCGAACATATCAACTCACTGACAAGAGCGATGTTTATTCATTCGGCGTATTGCTTGTAGAATTGATGACAGGGAGACATCCATTAGAACCAAAGAAACCTCCCAGTGAGAGAGTGACCATCAGATGGGCAATGCAGATGCTGAAACAAGGAGATGCTGTCATAGCCATGGACCGAAGGCTGTGGAGAAGCCCAGCTTCAACCATGGCGATGGAGAAGGTTATGAAGCTCGCCTTACAATGTCTTGCGCCGTTGAAGCAGTCACGACCTTCCATGAAGATTTGTGCAGAGATTCTTTGGGGAATCAGAAAAGAGTTGAGAGATCAAGCTATGACTAATGTTCCTCCTCTTGCTTCTCACCATTCTGCTGATTTCCCTATTAATGGTGATGGTGAAAAGAAGAGTAACAAGCTTGTGTCATCACTTGATGATGAAGAAGATGACGGCAACAACTATAAAAAATTTGTCTCTGCGTGA 1386 0.4127 MKKTPERHFVLSSQRNRNIGNDDTNKHNQKTRPSLKYFKSFVKKFAVLVAIFRSGKKKSAAEVSGGAVTRNRSRARFVPSFSTDVSSESNTKNSSWKFSNSYASSSTTSGQLGMGNFSFEELYKATGKFSADKIIGEGGFGTVYMGKLNDGSLVAIKRSKKTAHDKNLAEFKNEINTLSRIEHLNLVRLYGYLEHEDEKMIVVEYVGNGTLREHLNGTRGNGLEIGERLDIAIDVAHAITYLHMYTDRPIIHRDIKSSNILLTEKLRAKVADFGFARLASDDPAATHISTQIKGTAGYLDPEYLRTYQLTDKSDVYSFGVLLVELMTGRHPLEPKKPPSERVTIRWAMQMLKQGDAVIAMDRRLWRSPASTMAMEKVMKLALQCLAPLKQSRPSMKICAEILWGIRKELRDQAMTNVPPLASHHSADFPINGDGEKKSNKLVSSLDDEEDDGNNYKKFVSA 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1602 461 ProSitePatterns Protein kinases ATP-binding region signature. 135 157 IPR017441 GO:0005524
Alju08g1602 461 PANTHER OS01G0750732 PROTEIN 59 428 - -
Alju08g1602 461 SUPERFAMILY Protein kinase-like (PK-like) 104 404 IPR011009 -
Alju08g1602 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Alju08g1602 461 Gene3D Phosphorylase Kinase; domain 1 88 205 - -
Alju08g1602 461 Gene3D Transferase(Phosphotransferase) domain 1 206 421 - -
Alju08g1602 461 Pfam Protein tyrosine and serine/threonine kinase 131 401 IPR001245 GO:0004672|GO:0006468
Alju08g1602 461 MobiDBLite consensus disorder prediction 1 31 - -
Alju08g1602 461 ProSiteProfiles Protein kinase domain profile. 129 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1602 461 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 206 416 - -
Alju08g1602 461 MobiDBLite consensus disorder prediction 420 461 - -
Alju08g1602 461 MobiDBLite consensus disorder prediction 429 455 - -
Alju08g1602 461 SMART serkin_6 129 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1602 461 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 1 93 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1602 Alju-ChrAlju08 12878393 12881450 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1602 101 395 Receptor kinase-like Gene Family AT1G79620 45.875 4.25e-70 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Alju08g1602 PK_Tyr_Ser-Thr 3.1e-52 CL0016