Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1593 ATGAAGTGGGGAACAGCGGGAATGTTCTCACCTGGACAATACATCACCAATTCCAACACGAACTGGATTGTTGAAGATAATCGGAATCCGAGATGGACTCGCGCTGAGAACAAAATGTTCGAGAATGCTCTTGCGCTTTTCGATCAGGATACACCAGATCGATGGAAGAAAGTGGCTTCAATGATCCCAGGGAAGACGGTCGGCGATGTTCTGAGGCAGTACCAACAGCTTGAAGATGATGTTTATAACATCGAAGCTGGTCTGGTCTCAGTTCCGGACTATTATTACACCACAAATCCTCCTTCCTCATCTTTCACTTTGGACTGTTGGGCCAATTTTTCTTCTGGTTATGATCCCTGGTATGAATTCCATAGAAAGAGAAACTCCTCTATGAGACCGGCCTCTGAGAATGAAAGGAAAAAAGGAGTCCCTTGGACCGAAGAAGAACACAAACTGTTTCTTATGGGGCTGAAGAAGCATGGTAAAGGAGATTGGAGGAACATATCAAGGAACTTTGTGGTGACTCGAACGCCGACTCAAGTAGCTAGCCATGCTCAGAAATACTTCATAAGGCAACTCTCCGGAGGAGGAGGGAAAGACAAGAGAAGAGCAAGCATCCATGACATAACCACAGTGAACCTCACTGAAACTTCAACCAGAACTTCACGAAACAAAACCAAGAAGTCTTCTTCTTCTTGTTCTTCTTCTTCTACTTCACCGCCAGAGAAACACATGAACATGATGATGCCCTCATCACAGTCACACTCACCATCAGTACAGCAGAATAATTCTGCAGAAACACAGTTTCAGTGGACCCAACAACAACAACAACAGTCAGTGGATGCTCTGAGTGATCCTGTATTTGATGATGAACTGTTCATGTCTGATTTTAATGGGATTGGTGATGACCTATCATCCTATGGGAATGGTGATGACTTATCATCCTTTGATTTTAGACTTGAGGACCAGGATCTGTTCTCAAGTTCTCTTCTTCATCATGAATCTTCTTCCTACTTAGAACCTAAGAGTCAAAACATGGTTTTCCCGATGCCATGA 1056 0.4375 MKWGTAGMFSPGQYITNSNTNWIVEDNRNPRWTRAENKMFENALALFDQDTPDRWKKVASMIPGKTVGDVLRQYQQLEDDVYNIEAGLVSVPDYYYTTNPPSSSFTLDCWANFSSGYDPWYEFHRKRNSSMRPASENERKKGVPWTEEEHKLFLMGLKKHGKGDWRNISRNFVVTRTPTQVASHAQKYFIRQLSGGGGKDKRRASIHDITTVNLTETSTRTSRNKTKKSSSSCSSSSTSPPEKHMNMMMPSSQSHSPSVQQNNSAETQFQWTQQQQQQSVDALSDPVFDDELFMSDFNGIGDDLSSYGNGDDLSSFDFRLEDQDLFSSSLLHHESSSYLEPKSQNMVFPMP 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1593 351 ProSiteProfiles Myb-like domain profile. 137 189 IPR001005 -
Alju08g1593 351 MobiDBLite consensus disorder prediction 208 282 - -
Alju08g1593 351 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 26 275 IPR043363 -
Alju08g1593 351 ProSiteProfiles SANT domain profile. 145 193 IPR017884 -
Alju08g1593 351 MobiDBLite consensus disorder prediction 194 282 - -
Alju08g1593 351 SMART sant 28 80 IPR001005 -
Alju08g1593 351 SMART sant 141 191 IPR001005 -
Alju08g1593 351 SUPERFAMILY Homeodomain-like 30 86 IPR009057 -
Alju08g1593 351 FunFam Transcription factor SRM1 23 91 - -
Alju08g1593 351 Pfam Myb-like DNA-binding domain 144 189 IPR001005 -
Alju08g1593 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 137 193 IPR017930 -
Alju08g1593 351 Gene3D - 143 193 - -
Alju08g1593 351 NCBIfam myb-like DNA-binding domain, SHAQKYF class 140 192 IPR006447 GO:0003677
Alju08g1593 351 CDD SANT 144 189 IPR001005 -
Alju08g1593 351 SUPERFAMILY Homeodomain-like 139 192 IPR009057 -
Alju08g1593 351 FunFam transcription factor MYB1R1 143 194 - -
Alju08g1593 351 CDD SANT 31 77 IPR001005 -
Alju08g1593 351 Gene3D - 24 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1593 Alju-ChrAlju08 12571349 12572593 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju08g1593 Myb_DNA-binding 5.9e-13 CL0123