Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1583 ATGGCCACCTTTGCTGGTTTCTTGGGCAGGTTCCTCTCTCTTTTCATCCTCTTTGTCCATCTCGGCTGCTTCATCTCCTCCTCCGCCGCCGCCGGAGCCTCCGGCAGTGAAGCGGCAGAACAACGTGCCCGGAAGTCTTCTTCAAAGAAACGCAAGGTATCCCCTGTTTCGCACTCGCGGCAACCTTCTCCTTCACATCCCAAGTTCAAAACCCGTAAGGCTCTTTCTTCTTCTTGGACTTTCGTCAAACACCTTTTCTCCCACAAATCCTGCAAAACCAGTGACGTTGCTCAGGGATCGCCGCAATCCTCCGCCACCACTGCTATTTCCTCCGCTTCCGCCGTCTCCACCGCACTGCCTTCTTTGACATCCACCAGATCCTCCCAGCAGTCGTTGGTCTCTCTGGCGCAAGCCGAATCGCACGCGCTGGATCTTCCCGGGAAAAAACCGGGTGCATCGTGCCCGGAATCCGATATCGCCGCCGACAATAACCACTTCTTCCCCCTCCGCAACGACATCTTCCCTTGCACCGCCTGCGGCGAGGTTTTCCAGAAACCGCAAGTTCTCGAACAGCATCAATCGCTGAAACACGCCGTGTCGGAGCTGGTGGAGACAGACGCGGGCCACAACATAGTGCGGATAATATTCAAGTCGGGTTGGACCAACACACAGAAATGCCCCAAAATAAGTCGGATCCTGAAGATCCATAACCACCCGAAGATCCTCTCCAAGTTCGAGGAATACAGAGAGACGGTGAAGGCCAAGGCCGCACGAAATGGCGCCGTAAAGAAGCGCGACGAAAGATGCATAGCCGACGGCAACGAGCTCATGAGATTCCACTGTTCCACATTCCTCTGCGATTTAGGACTCAATGGGAATTCCGGCATTTGTGGCCAGCAATATTGTAATATCTGCGGGATCATCAAATCGGGGTTCTCACCCAAGTTGGACGGAATATCCACGCTATCGACGAGCTGGAGGGCGCACGTGGCCATCCCGGAGGAGGTGGAGGAGGAGTTCAAGTTCATGAACGTGAAGCGGGCCATGCTGGTATGCCGGGTCATAGCCGGTCGGGTCGGCACTGACTCGGACGAAGCGGACAAAGAGGACGGGGGTTTTGATTCGGTGATGGCGCGCGGCGGAAGCGGAGTTTACACCCGGCTCGACGAAGAGGAGCTGTTGGTGTTCAATCCTAGAGCTGTGCTTCCCTGCTTTGTGATTGTGTACAGCTTGATGATCAGGAGGGCTAAAGGCAACGGCTGCTTCTTTGTGAAGTTGATTGGTTATTGTTAG 1293 0.5491 MATFAGFLGRFLSLFILFVHLGCFISSSAAAGASGSEAAEQRARKSSSKKRKVSPVSHSRQPSPSHPKFKTRKALSSSWTFVKHLFSHKSCKTSDVAQGSPQSSATTAISSASAVSTALPSLTSTRSSQQSLVSLAQAESHALDLPGKKPGASCPESDIAADNNHFFPLRNDIFPCTACGEVFQKPQVLEQHQSLKHAVSELVETDAGHNIVRIIFKSGWTNTQKCPKISRILKIHNHPKILSKFEEYRETVKAKAARNGAVKKRDERCIADGNELMRFHCSTFLCDLGLNGNSGICGQQYCNICGIIKSGFSPKLDGISTLSTSWRAHVAIPEEVEEEFKFMNVKRAMLVCRVIAGRVGTDSDEADKEDGGFDSVMARGGSGVYTRLDEEELLVFNPRAVLPCFVIVYSLMIRRAKGNGCFFVKLIGYC 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1583 430 MobiDBLite consensus disorder prediction 57 72 - -
Alju08g1583 430 MobiDBLite consensus disorder prediction 35 72 - -
Alju08g1583 430 Gene3D - 198 410 - -
Alju08g1583 430 SUPERFAMILY ADP-ribosylation 199 411 - -
Alju08g1583 430 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 77 409 - -
Alju08g1583 430 ProSitePatterns Zinc finger C2H2 type domain signature. 176 197 IPR013087 -
Alju08g1583 430 ProSiteProfiles Zinc finger C2H2 type domain profile. 174 202 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1583 Alju-ChrAlju08 12494947 12496396 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1583 79 411 C2H2 Transcription Factor Family AT2G29660 54.227 8.78e-109 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju08g1583 None None None