Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1571 ATGTTATCCATTGAAGCATTCATAGTTCAATTCAACATATACGCGACCGCTCAACCAGCTTCATTTCCTCACATAGCAGAGTCTGATATATATATACACACACACACAAATATAAGTTCATTCTCTTCTACAATTAATATCTCTAACTCAACAGAGAGAAGAGAGAGAGAGGGAGGGAGAGAGAGAGAGATGGAGGATGATATTGAGAAGAAAGGAGAGGGAAGTGGGAAGAATAAGAATATGATGATGATGAAGTCGGAGATAATAATAGAGGGAGATAATAGTAATTTTGGGATGAGGGGTCAATTGTTGAGGAAAATTATGGGCAACTTGCAAGAGGTCATCTTCGGCACTAAGCTTGCTGTGCTTTTTCCCGCCATCCCCCTCGCTGTTGCAGCTGATACCTATCACTTTGGTCGAGCGTGGATATTTGCTTTGAGCTTACTTGGGCTGGCTCCTCTAGCTGAACGTGTTAGCTTCCTCACTGAACAAATCGCATATTTCACGGGCCCAACAGTTGGAGGACTCCTGAATGCAACATGTGGGAATGCAACTGAGATGATAATAGCACTATTGGCACTTCACAAGAACAAAATCAATGTGGTCAAGTTCTCTCTTTTGGGTTCCATTCTCTCAAATCTCCTCTTAGTTCTTGGCTCTTCACTTCTCTGTGGAGGCCTTGCCAACCTCAAGAAAGAACAGAGATATGACAGAAAACAGGCAGATGTAAACTCACTCCTTTTGCTTCTGGGGTTGCTCTGCCATTTGCTGCCATTGATCTTTAAGTATTCCCTAACAGGGGACCATTACCCTGTAGCCACTAGTACTCTTCAATTGTCAAGAGCAAGTAGTATTGTTATGCTTCTTGCTTATGTTGCTTATATCTTCTTCCAATTGAAAACTCACAGACGGTTATTTGATTCACAAGAGGAAGATGGTGAAGAAGAGAAGGCTGTGATAGGATTTTGGGTAGCATTTACCTGGTTGGTGGGCATGACACTCCTCATATCTTTGCTTTCTGAATATGTTGTGGGAACTATTGAGGCTGCTTCAGAATCTTGGGGTATTTCTGTGAGCTTCATTAGCATAATTTTGCTCCCAATTGTGGGGAATGCTGCAGAACATGCTGGTTCAATCATATTTGCTTTTAAGAACAAGCTGGATATATCTCTAGGTGTTGCTATGGGATCTGCAACTCAAATTTCTATGTTTGTGGTTCCATTAAGTGTGATTGTTGCATGGATAATGGGTGTAAAAATGGACCTAGATTTTAATCTCCTAGAAACTGGGTGTCTTGCTTTGACAATACTAGTCACAGCTTTCACTTTGCAGGATGGAACTTCACATTATATGAAAGGAGTAGTGCTTTTCCTGTGTTACATTGTCATTGCTGCATGCTTTTTTGTTCATAAAGCTCCATTATCCGATCAAATTCCTGGGGAGAATGTTAGATTTCAACCAACTAAGGATGCCATGGCCACCTGA 1485 0.4135 MLSIEAFIVQFNIYATAQPASFPHIAESDIYIHTHTNISSFSSTINISNSTERREREGGREREMEDDIEKKGEGSGKNKNMMMMKSEIIIEGDNSNFGMRGQLLRKIMGNLQEVIFGTKLAVLFPAIPLAVAADTYHFGRAWIFALSLLGLAPLAERVSFLTEQIAYFTGPTVGGLLNATCGNATEMIIALLALHKNKINVVKFSLLGSILSNLLLVLGSSLLCGGLANLKKEQRYDRKQADVNSLLLLLGLLCHLLPLIFKYSLTGDHYPVATSTLQLSRASSIVMLLAYVAYIFFQLKTHRRLFDSQEEDGEEEKAVIGFWVAFTWLVGMTLLISLLSEYVVGTIEAASESWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKLDISLGVAMGSATQISMFVVPLSVIVAWIMGVKMDLDFNLLETGCLALTILVTAFTLQDGTSHYMKGVVLFLCYIVIAACFFVHKAPLSDQIPGENVRFQPTKDAMAT 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1571 494 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 75 473 IPR004713 GO:0006812|GO:0008324|GO:0016020
Alju08g1571 494 MobiDBLite consensus disorder prediction 47 77 - -
Alju08g1571 494 FunFam Vacuolar cation/proton exchanger 315 469 - -
Alju08g1571 494 Pfam Sodium/calcium exchanger protein 141 299 IPR004837 GO:0016020|GO:0055085
Alju08g1571 494 Pfam Sodium/calcium exchanger protein 325 466 IPR004837 GO:0016020|GO:0055085
Alju08g1571 494 NCBIfam calcium/proton exchanger 106 468 - -
Alju08g1571 494 MobiDBLite consensus disorder prediction 50 76 - -
Alju08g1571 494 FunFam Vacuolar cation/proton exchanger 171 314 - -
Alju08g1571 494 Gene3D - 171 318 IPR044880 -
Alju08g1571 494 Gene3D - 319 469 IPR044880 -
Alju08g1571 494 NCBIfam calcium/proton exchanger 125 468 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1571 Alju-ChrAlju08 12382611 12386879 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1571 104 478 Antiporters AT2G38170 68.668 0.0 514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g1571 08 12382611 12386879 Alju08g1571 08 12382611 12386879 ECH