Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1565 ATGAAGGAGGTGACGGTGATGATCTCGGCTCTCAGTCTCACTCGCGGAGCTAGTCGGCGAATCAGAGTGTTTGGAAGAAGCATAGGTATGGCGAAAGTGACGTCGTTGTTGCTCTGGGCACTGGTCCTCTTCGGCACTCTCGCTCTCATCCAGGCGAAGAAGTCAAAGGAGGATTTGAAAGAAGTGACACACAAGGTTTATTTCGACATCGAGATTGATGGAAAGCCTGCTGGTCGTATTGTAATGGGTCTTTTTGGGAAGACAGTTCCTAAAACTGCAGAAAACTTTCGGGCTCTCTGCACAGGGGAGAAAGGAACTGGAAAAAGTGGAAAGCCTCTCCATTACAAGGGCAGCACATTCCACAGGATTATTCCTAGCTTTATGATCCAAGGAGGTGATTTTACCCATGGCAACGGAATGGGCGGTGAGTCAATCTATGGAGAGAAGTTTGCCGATGAGAACTTCAAGCTGAAGCATACTGGACCAGGACTTCTATCAATGGCAAACGCTGGTCCTGATACCAATGGTTCACAATTCTTCATTACAACGGTGACCACTAGCTGGTTGGATGGAAGGCACGTCGTGTTTGGGAAAGTGATTTCTGGAATGGACGTGGTGTACAAGATGGAGGCTGAAGGAAAGCAAAGTGGCACCCCCAAGAGCAAGGTTGCGATTGCTGATAGCGGTGAACTCCCATTATAA 702 0.4829 MKEVTVMISALSLTRGASRRIRVFGRSIGMAKVTSLLLWALVLFGTLALIQAKKSKEDLKEVTHKVYFDIEIDGKPAGRIVMGLFGKTVPKTAENFRALCTGEKGTGKSGKPLHYKGSTFHRIIPSFMIQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVISGMDVVYKMEAEGKQSGTPKSKVAIADSGELPL 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1565 233 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 67 230 IPR002130 GO:0000413|GO:0003755
Alju08g1565 233 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 65 231 - -
Alju08g1565 233 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 115 132 IPR020892 GO:0003755|GO:0006457
Alju08g1565 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 132 IPR002130 GO:0000413|GO:0003755
Alju08g1565 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 84 99 IPR002130 GO:0000413|GO:0003755
Alju08g1565 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 163 178 IPR002130 GO:0000413|GO:0003755
Alju08g1565 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 178 190 IPR002130 GO:0000413|GO:0003755
Alju08g1565 233 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 191 206 IPR002130 GO:0000413|GO:0003755
Alju08g1565 233 CDD cyclophilin_ABH_like 64 229 - -
Alju08g1565 233 Gene3D - 51 232 IPR029000 -
Alju08g1565 233 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 67 227 IPR002130 GO:0000413|GO:0003755
Alju08g1565 233 SUPERFAMILY Cyclophilin-like 62 231 IPR029000 -
Alju08g1565 233 FunFam Peptidyl-prolyl cis-trans isomerase 59 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1565 Alju-ChrAlju08 12343107 12348443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1565 78 210 U-box Gene Family AT5G67530 47.015 5.58e-29 112