Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1547 ATGTCTTGCTCCATCGTCGTCCCTAACTCTCCAGCGTTCTCTCCTTCTTCTTCTCTGTTCTGCAACTGTACAATGAACTCTGTTATATCTCCTCCTTCTTCTCCTTCACCTTCTTCTTCCAGATTTAGGCTCTTCAAGCCTCCAATTGCCTTACCCACTCTGCCGTCCGCTTCTTCTCCGTCATCCTCGTCCTCCTCCTCGCCGCCGGCGAACTCCCTCTTGAAGAGGAAGAGGCCTACAAGGCTTGATATTCCTGTTGCGTCCTTCGCATTTGGTGCTCCGGCGACGCCGTCTGCGGCGGCGGAGAGGGATTTCTTGGAGGCTGAAGGAGATGGGTTTTCTGTGTATTGCAAGAGGGGAAGGAGGGAGTTCATGGAGGACCGTTACTCTGCTACCGTTAATCTTCAAGGAAAACCAAAGCAGGCTTTCTTTGGAATATTCGATGGGCATGGAGGAGCAAAAGCTGCGGAATTTGTTGCTCATAACTTGGAAAAGAATGTCTTGAAAGAAGTAATTATGAGGAGTGATGAAGAAGAAGAAGATGGTGACATTGAAGAGGCAGTGAAACATGGTTACTTGACCACAGATTCTGAGTTCCTAAAAGAGGATGTCCAAGGTGGTTCTTGCTGTGTGACAGCATTGATCAGAGACGGCAACCTCATTGTGTCCAACGTTGGTGATTGTCGTGCCGTCGTTAGCAGAGGTGGCAAAGCCGAGGCCCTTACATCGGATCATCGGCCCTCAAGGGAAGACGAGAAGGACAGAATTGAAGCTCTGGGTGGCTATGTAGATCTATGTCATGGAGTTTGGAGGATCCAAGGATCTCTTGCCGTGTCTCGAGGAATTGGAGATAAACACCTGAAGCAATGGGTGACAGCAGAACCAGAGACTAAAATTCTCAAAATTGAAGCTGAACATGACTTGTTAATACTGGCTTCAGATGGATTATGGGATAAGGTTAGTAATCAGGAAGCAGTGGATATTGCTCGTTCTTTTTGTGTAGAGAGTGATAAGCCACAGCCATTATTGTTGGCCTGTAAAAAGCTTGTAGACTTGTCAGCTTCACGAGGCTCTTTTGATGATATAAGCGTTGTGGTAATCAAGTTGGATCACTATATATGA 1122 0.4706 MSCSIVVPNSPAFSPSSSLFCNCTMNSVISPPSSPSPSSSRFRLFKPPIALPTLPSASSPSSSSSSSPPANSLLKRKRPTRLDIPVASFAFGAPATPSAAAERDFLEAEGDGFSVYCKRGRREFMEDRYSATVNLQGKPKQAFFGIFDGHGGAKAAEFVAHNLEKNVLKEVIMRSDEEEEDGDIEEAVKHGYLTTDSEFLKEDVQGGSCCVTALIRDGNLIVSNVGDCRAVVSRGGKAEALTSDHRPSREDEKDRIEALGGYVDLCHGVWRIQGSLAVSRGIGDKHLKQWVTAEPETKILKIEAEHDLLILASDGLWDKVSNQEAVDIARSFCVESDKPQPLLLACKKLVDLSASRGSFDDISVVVIKLDHYI 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1547 373 MobiDBLite consensus disorder prediction 54 77 - -
Alju08g1547 373 SMART PP2C_4 102 367 IPR001932 -
Alju08g1547 373 PANTHER PROTEIN PHOSPHATASE 2C 68 368 IPR015655 GO:0004722|GO:0006470
Alju08g1547 373 Pfam Protein phosphatase 2C 113 361 IPR001932 -
Alju08g1547 373 SUPERFAMILY PP2C-like 113 370 IPR036457 -
Alju08g1547 373 ProSitePatterns PPM-type phosphatase domain signature. 143 151 IPR000222 GO:0043169
Alju08g1547 373 ProSiteProfiles PPM-type phosphatase domain profile. 112 369 IPR001932 -
Alju08g1547 373 Gene3D - 106 373 IPR036457 -
Alju08g1547 373 MobiDBLite consensus disorder prediction 55 73 - -
Alju08g1547 373 FunFam probable protein phosphatase 2C 25 105 372 - -
Alju08g1547 373 SMART PP2C_SIG_2 120 369 IPR001932 -
Alju08g1547 373 CDD PP2Cc 112 369 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1547 Alju-ChrAlju08 12136531 12138192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1547 1 373 PP2C-type Phosphatase Gene Family AT2G30020 60.396 5.72e-159 450
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g1547 08 12136531 12138192 Alju07g0775 07 13152016 13153897 CCT
Alju08g1547 08 12136531 12138192 Alju08g1547 08 12136531 12138192 ECH
Alju08g1547 08 12136531 12138192 Alju07g0775 07 13152016 13153897 ECH