Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Alju08g1547 | ATGTCTTGCTCCATCGTCGTCCCTAACTCTCCAGCGTTCTCTCCTTCTTCTTCTCTGTTCTGCAACTGTACAATGAACTCTGTTATATCTCCTCCTTCTTCTCCTTCACCTTCTTCTTCCAGATTTAGGCTCTTCAAGCCTCCAATTGCCTTACCCACTCTGCCGTCCGCTTCTTCTCCGTCATCCTCGTCCTCCTCCTCGCCGCCGGCGAACTCCCTCTTGAAGAGGAAGAGGCCTACAAGGCTTGATATTCCTGTTGCGTCCTTCGCATTTGGTGCTCCGGCGACGCCGTCTGCGGCGGCGGAGAGGGATTTCTTGGAGGCTGAAGGAGATGGGTTTTCTGTGTATTGCAAGAGGGGAAGGAGGGAGTTCATGGAGGACCGTTACTCTGCTACCGTTAATCTTCAAGGAAAACCAAAGCAGGCTTTCTTTGGAATATTCGATGGGCATGGAGGAGCAAAAGCTGCGGAATTTGTTGCTCATAACTTGGAAAAGAATGTCTTGAAAGAAGTAATTATGAGGAGTGATGAAGAAGAAGAAGATGGTGACATTGAAGAGGCAGTGAAACATGGTTACTTGACCACAGATTCTGAGTTCCTAAAAGAGGATGTCCAAGGTGGTTCTTGCTGTGTGACAGCATTGATCAGAGACGGCAACCTCATTGTGTCCAACGTTGGTGATTGTCGTGCCGTCGTTAGCAGAGGTGGCAAAGCCGAGGCCCTTACATCGGATCATCGGCCCTCAAGGGAAGACGAGAAGGACAGAATTGAAGCTCTGGGTGGCTATGTAGATCTATGTCATGGAGTTTGGAGGATCCAAGGATCTCTTGCCGTGTCTCGAGGAATTGGAGATAAACACCTGAAGCAATGGGTGACAGCAGAACCAGAGACTAAAATTCTCAAAATTGAAGCTGAACATGACTTGTTAATACTGGCTTCAGATGGATTATGGGATAAGGTTAGTAATCAGGAAGCAGTGGATATTGCTCGTTCTTTTTGTGTAGAGAGTGATAAGCCACAGCCATTATTGTTGGCCTGTAAAAAGCTTGTAGACTTGTCAGCTTCACGAGGCTCTTTTGATGATATAAGCGTTGTGGTAATCAAGTTGGATCACTATATATGA | 1122 | 0.4706 | MSCSIVVPNSPAFSPSSSLFCNCTMNSVISPPSSPSPSSSRFRLFKPPIALPTLPSASSPSSSSSSSPPANSLLKRKRPTRLDIPVASFAFGAPATPSAAAERDFLEAEGDGFSVYCKRGRREFMEDRYSATVNLQGKPKQAFFGIFDGHGGAKAAEFVAHNLEKNVLKEVIMRSDEEEEDGDIEEAVKHGYLTTDSEFLKEDVQGGSCCVTALIRDGNLIVSNVGDCRAVVSRGGKAEALTSDHRPSREDEKDRIEALGGYVDLCHGVWRIQGSLAVSRGIGDKHLKQWVTAEPETKILKIEAEHDLLILASDGLWDKVSNQEAVDIARSFCVESDKPQPLLLACKKLVDLSASRGSFDDISVVVIKLDHYI | 373 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Alju08g1547 | 373 | MobiDBLite | consensus disorder prediction | 54 | 77 | - | - | |
Alju08g1547 | 373 | SMART | PP2C_4 | 102 | 367 | IPR001932 | - | |
Alju08g1547 | 373 | PANTHER | PROTEIN PHOSPHATASE 2C | 68 | 368 | IPR015655 | GO:0004722|GO:0006470 | |
Alju08g1547 | 373 | Pfam | Protein phosphatase 2C | 113 | 361 | IPR001932 | - | |
Alju08g1547 | 373 | SUPERFAMILY | PP2C-like | 113 | 370 | IPR036457 | - | |
Alju08g1547 | 373 | ProSitePatterns | PPM-type phosphatase domain signature. | 143 | 151 | IPR000222 | GO:0043169 | |
Alju08g1547 | 373 | ProSiteProfiles | PPM-type phosphatase domain profile. | 112 | 369 | IPR001932 | - | |
Alju08g1547 | 373 | Gene3D | - | 106 | 373 | IPR036457 | - | |
Alju08g1547 | 373 | MobiDBLite | consensus disorder prediction | 55 | 73 | - | - | |
Alju08g1547 | 373 | FunFam | probable protein phosphatase 2C 25 | 105 | 372 | - | - | |
Alju08g1547 | 373 | SMART | PP2C_SIG_2 | 120 | 369 | IPR001932 | - | |
Alju08g1547 | 373 | CDD | PP2Cc | 112 | 369 | IPR001932 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Alju08g1547 | Alju-ChrAlju08 | 12136531 | 12138192 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Alju08g1547 | 1 | 373 | PP2C-type Phosphatase Gene Family | AT2G30020 | 60.396 | 5.72e-159 | 450 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Alju08g1547 | 08 | 12136531 | 12138192 | Alju07g0775 | 07 | 13152016 | 13153897 | CCT | |
Alju08g1547 | 08 | 12136531 | 12138192 | Alju08g1547 | 08 | 12136531 | 12138192 | ECH | |
Alju08g1547 | 08 | 12136531 | 12138192 | Alju07g0775 | 07 | 13152016 | 13153897 | ECH |