Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1546 ATGACTTCTTGGGTAAGAGGGAATTGTATCGGTAAGGGTGCGTTCGGCACCGTCAGTGTGGGGATTGACCGATGGGACGGTCGGCTTTTTGCGGTGAAATCGGTGGATCCCGAGATGGGTCTTCCGGCTCAGGTGAAGGCTTTGGAGAATGAGATTCGGATTCTCCGGAGGGTGTCGCCGTCGCCTTACGTGGTGGGGTTTCTCGGGGATGACTTGACGGCGTCGGGCCGGAATTTGCACATGGAGTATATGCCGGGTGGGACCCTTGCTGACCTTGCGTACCGGAATGCTGACGTGGACGAGGAGTTGGTAAGGTACTATACGTGGTGCCTGGTGAACGCGCTGAGGCACGTCCACTCCAACGGCGTCTTGCACTGCGACGTGAAGGGGAGGAACGTTCTGTTGGGTCTTAACGGCTGCGTTGCGAAACTCGCCGATTTTGGCTCAGCCGTCGAGTTTCCCAGTGAAGTTTGCTCGGCGGCGGTTCTGCCACGGGGGAGCCCGCTTTGGATGGCTCCGGAGGTGATCCGGGGGGAGTATCAGGGACCAGAGTCCGACGTGTGGTCCTTGGGTTGTACGGTGATCGAGATGGTCACCGGGAAGCCGGCATGGGAAGATCACGGCGGCGACACGCTGAGTCGAATCGGATACTCTGACGACTTACCCGAATTCCCGAGTCAAATTTCAGTGCTCGGTCGGGATTTCCTCGAGAAGTGCCTGATGAAAGAACATAAAGAACGATGGAGCTGCGATCAGCTGCTGAAGCATCCATTTTTGTCATTTGTGTCTCCCAGTAAGCCGGTCGAGTCGTCTCCTCGTTGCGTTCTTGATTGGGGCAACTTAGAATTCGCCGAAGAGGATGAAGTAGAAGAGGAAATCAGATTTGATGACAATGCTGAAGCCTCAGCTAAGGAGAGAATCCGTAAATTAGCCACGACACTGAGGGCAGATTGGGAAACAGAAGATTGGGTGGCGGTGAGAGGACAGACGTCAGACGCAGAAGCTACAGCAATGGAAACAGGGGAGGGTGGAAGTGGAAGTGGGAGTGGGGACGAAGAAGGGGCAAATTCGGAATATCCGCATCGGACAGGGGTAGAAGAGGAAATGAAAGCAGGGACAAGTCGGGAATATTCGAATAATGTAAGAAGGGCAAAATGGCAAAGGGAAAATCCGGGGAAGTGGAAATCGGATGATAAGCGGTTGGTGGTGTGGTGGCGGTGTGATCAGAGGGAAAGCAACGAAAGAAGCAACTTAGCTTGTCGTAGCTGGCCATATACGTATATGTCAGAAAATGTGGATATACATTTAGTGCTGAGGATAATAAAATTAATGATACGCATTATTCACAGCATGTGTTGTAATTTGCTCAAATCATGTTACTTAAATTTCTTACCATTAATAAATTCAACTCTGTTATTCTCTCCAATTGTTTATTTTCTGCCTTCTTTCCTTGAACATGCCAAGAAAATGTGGACGGGTTTTTCGGCGGAATGGCGCTTGCTTTCCTCTGGTAGGGTTTGA 1521 0.5128 MTSWVRGNCIGKGAFGTVSVGIDRWDGRLFAVKSVDPEMGLPAQVKALENEIRILRRVSPSPYVVGFLGDDLTASGRNLHMEYMPGGTLADLAYRNADVDEELVRYYTWCLVNALRHVHSNGVLHCDVKGRNVLLGLNGCVAKLADFGSAVEFPSEVCSAAVLPRGSPLWMAPEVIRGEYQGPESDVWSLGCTVIEMVTGKPAWEDHGGDTLSRIGYSDDLPEFPSQISVLGRDFLEKCLMKEHKERWSCDQLLKHPFLSFVSPSKPVESSPRCVLDWGNLEFAEEDEVEEEIRFDDNAEASAKERIRKLATTLRADWETEDWVAVRGQTSDAEATAMETGEGGSGSGSGDEEGANSEYPHRTGVEEEMKAGTSREYSNNVRRAKWQRENPGKWKSDDKRLVVWWRCDQRESNERSNLACRSWPYTYMSENVDIHLVLRIIKLMIRIIHSMCCNLLKSCYLNFLPLINSTLLFSPIVYFLPSFLEHAKKMWTGFSAEWRLLSSGRV 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1546 506 SUPERFAMILY Protein kinase-like (PK-like) 3 260 IPR011009 -
Alju08g1546 506 MobiDBLite consensus disorder prediction 355 373 - -
Alju08g1546 506 Gene3D Transferase(Phosphotransferase) domain 1 2 330 - -
Alju08g1546 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Alju08g1546 506 MobiDBLite consensus disorder prediction 329 393 - -
Alju08g1546 506 CDD STKc_MAPKKK 3 259 - -
Alju08g1546 506 SMART serkin_6 4 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1546 506 Pfam Protein kinase domain 7 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1546 506 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 341 - -
Alju08g1546 506 FunFam Serine threonine protein kinase putative 2 311 - -
Alju08g1546 506 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Alju08g1546 506 ProSiteProfiles Protein kinase domain profile. 4 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1546 Alju-ChrAlju08 12123160 12124832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1546 4 361 MAP Kinase Kinase Kinase AT1G07150 56.077 1.93e-126 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Alju08g1546 Pkinase 1.6e-54 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g1546 08 12123160 12124832 Alju08g1546 08 12123160 12124832 ECH