Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1538 ATGTCCACCACCCAACAACCTTCTGACTCCCACACCAACCCTTTCACTCAAATGCTTCAGAGCATCTTCTCCGACAACAGCAACATCATGCTCGCCGCCGTCATCTCCCTCCTCCTCGTCATCCTCTTCGTCCTCCTCCTCCACCTCTATGCCAAATGGTTCCTCGCCCACGCTCATGCCCAATCCCAATCCCGCCGCCGACCTCCCTCCGTCACCGTCTCCGACGTCATTGGCCCGGCCCGCTTCCACCACTTCCACAGCTTCAACCTCCAAGACTCCCCCATTTCCCATTCCCCCACTAAAGGCCTCGATTCCGCATCCATTTCTGCCATCCCTGTTTTCGTGTTCGAAGCAGAGAACACACTGAACCAAGAAGCCGATGAACGAGATTTGGAATGCGTAATTTGCTTGAGCGTTTTCCAGAACGGAGAAACCGGCCGGAGCTTACCCAAGTGCGCTCACGCTTTTCACGTCCAGTGTATCGATATGTGGTTAAGCTCTCATTCGAATTGCCCAATCTGCAGGGCTCCCATCGGGGAGCTTGATTCTCAGTTTGGCTCTGTTCTTGAAGATGATCCCTCTGCTGTGATTGAGATTGTGATCGACAATTCTCCGCGTCCTGAGATCATCAGCGAGAACGCCGACGGTGGAACTGAGAGTATTAGTATTAGTACTATTAATAATAATGATAATGATCAAGGAGGGGTAAGTGACTCTGTTATTTCTATATCAGAAACTACTTCATCCTCATTGTTGGGTTGTTCTTTGAAGAGGATGTTCAGTAAAGTTTTTCCTTCTTCCAATGTCACTGAATTAGGCACATCGTAA 828 0.4976 MSTTQQPSDSHTNPFTQMLQSIFSDNSNIMLAAVISLLLVILFVLLLHLYAKWFLAHAHAQSQSRRRPPSVTVSDVIGPARFHHFHSFNLQDSPISHSPTKGLDSASISAIPVFVFEAENTLNQEADERDLECVICLSVFQNGETGRSLPKCAHAFHVQCIDMWLSSHSNCPICRAPIGELDSQFGSVLEDDPSAVIEIVIDNSPRPEIISENADGGTESISISTINNNDNDQGGVSDSVISISETTSSSLLGCSLKRMFSKVFPSSNVTELGTS 275
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1538 275 CDD RING-H2_EL5-like 132 175 - -
Alju08g1538 275 SMART ring_2 133 174 IPR001841 -
Alju08g1538 275 ProSiteProfiles Zinc finger RING-type profile. 133 175 IPR001841 -
Alju08g1538 275 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 22 178 IPR044675 -
Alju08g1538 275 FunFam RING-H2 finger protein ATL1 90 180 - -
Alju08g1538 275 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 89 179 IPR013083 -
Alju08g1538 275 Pfam Ring finger domain 132 175 IPR001841 -
Alju08g1538 275 SUPERFAMILY RING/U-box 123 181 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju08g1538 Alju-ChrAlju08 12055683 12056510 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1538 23 181 Rapid Response to Elicitors AT3G16720 35.849 3.37e-28 108