LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju08g1537	ATGAAGTTCATAATTCGAAACTATGATGGACAATCTGACAAAGCTCAAGTGGAAGACATCGAGAGAAGATGCGAGGTAGGCCCATCAGAAAGTGTGTTCCTCTTCACTGACACTTTGGGTGACCCCATCTGCAGGATCCGAAACAGTCCGATGTACAACATGCTGGTCGCAGAGATGGAGAAGGAGTTAATTGGGGTCATTCAAGGCACTATAAAAGTGGTTACACTTGCAACTCATGACTTGGCCAAGGTGGGCTATGTGTTGGGGCTAAAGGTGGCTCCAAATCATCGGCGAAAACGGGTCGGATCGAGCCTACTACGAAGGCTAGAAGAATGGTTCTGTTCCAATGACGTGGACTATTCATATATGGCCACCATGAAAGATAACCATGCTTCTATCAGCTTCTTCATGGGCAAGTTTGGTTACACCAAGTTTAGAACTCCGACTATACTTGTAAACCCAGTGAACCATCTTCACTTGAAGATCTCATCCAACATTGAGATTGTGAGGCTCAAGGTTGATCAAGCTGAATCACTTTACAGAAAGTTCATGGGATCTTCTGATTTATTTCCTGATGATATAGATTGCATTCTTAGGAACAAGCTAAGTTTAGGGACATGGGTTGCTTATTTTAAAGGAGAGAGTTCATGGGATGATTTTGGAAACGATGGTCGAGTTCCTAGTAACTGGGCTATGCTTAGTGTGTGGAACTGTGGGAAAATCTTTAATCTGAGGTTAAAGGAAGCAACTTTTTCTTGCATGTTATGTAGGAAGAGTCAGAGTTTGATTGATAAGGTGTTTCCATGCTTGAAAGGGCCTGCTTTGCCTGATTTCTTGAAGCCATTTGGGTTTTACTTTGTATATGGGTGGTGTTGTGATGGGCCATTGTGTGGGAAGCTTGTTAGAGGGTTGTGCAAGTTTGTGCACAACATGGCTGCAGAATCTGAGGATTGTGAGAACATCAAGGTGGTTGTGAGTGAAGTTGGAGGAAGAGATAAGATTAAGAATCATATCCCACGTTGGAAATTGCTGTCTTGCCAGGAGGACTTGTGGTGCGTAAAGGCCTTGAAAAATAATGATGGGGCACTACACAAGTTTCATGAATTGACCAAAATCCCACCAACAAGAGCTCTTTTTGTAGATCCAAGGGAGGTTTAA	1158	0.4309	MKFIIRNYDGQSDKAQVEDIERRCEVGPSESVFLFTDTLGDPICRIRNSPMYNMLVAEMEKELIGVIQGTIKVVTLATHDLAKVGYVLGLKVAPNHRRKRVGSSLLRRLEEWFCSNDVDYSYMATMKDNHASISFFMGKFGYTKFRTPTILVNPVNHLHLKISSNIEIVRLKVDQAESLYRKFMGSSDLFPDDIDCILRNKLSLGTWVAYFKGESSWDDFGNDGRVPSNWAMLSVWNCGKIFNLRLKEATFSCMLCRKSQSLIDKVFPCLKGPALPDFLKPFGFYFVYGWCCDGPLCGKLVRGLCKFVHNMAAESEDCENIKVVVSEVGGRDKIKNHIPRWKLLSCQEDLWCVKALKNNDGALHKFHELTKIPPTRALFVDPREV	385

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju08g1537	385	PANTHER	ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN	2	385	-	-
	Alju08g1537	385	Pfam	Acetyltransferase (GNAT) family	45	142	IPR000182	GO:0016747
	Alju08g1537	385	ProSiteProfiles	Gcn5-related N-acetyltransferase (GNAT) domain profile.	3	167	IPR000182	GO:0016747
	Alju08g1537	385	CDD	NAT_SF	54	113	-	-
	Alju08g1537	385	Gene3D	-	11	149	-	-
	Alju08g1537	385	SUPERFAMILY	Acyl-CoA N-acyltransferases (Nat)	1	146	IPR016181	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju08g1537	Alju-ChrAlju08	12050671	12051959	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	GNAT	Alju08g1537		Acetyltransf_1	8.4e-14	CL0257