Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1534 ATGTTGCTTACGATAATATTGGGAAACTTTGGAGGGTTCGTAAACCCCAAACCAAAAGTAGATTACAACACCACCGAGTTCTACGCAAAACAGGACCAACAACAGAACACTCTGTCTTCGTCGTTTACCGATTGCGATTCAATGGAAGCCGCAAAATGCAGCAAAATCCGGTGTATTGTCAGGCTGCGTCAGATGCTGCGACGGTGGCGCAACAAGGCTCGCATGAACGGCGTTCCGTCGGATGTTCCGCCGGGCCACGTGGCAGTCCGGGTCGGCCGAGACTGTCCCCGGAGGTATGTGGTGAAGGCCACCTATCTGAACCACCCCTTCTTCAAGAAGCTACTGAATCAGGTCGAGGAAGAGTATGGCTTCTCCAACACCGGACCGCTTTCCATTCCTTGCGACGAAGAAACCTTCCAAGAGATTCTCCGGTTCGTTTCCCGGTCGGGCTCGGGCAGATCGGCCGGGTTCCGTAACCTCGACGAGCTTCACAGGTATTGCCATGAGGGTTTGAGGAACAATCTGGAAGTCTGGCAAGAATGTCGACCGCTGCTTCATGGGTTTACTTCTGCTCAGTGA 579 0.532 MLLTIILGNFGGFVNPKPKVDYNTTEFYAKQDQQQNTLSSSFTDCDSMEAAKCSKIRCIVRLRQMLRRWRNKARMNGVPSDVPPGHVAVRVGRDCPRRYVVKATYLNHPFFKKLLNQVEEEYGFSNTGPLSIPCDEETFQEILRFVSRSGSGRSAGFRNLDELHRYCHEGLRNNLEVWQECRPLLHGFTSAQ 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1534 192 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 67 142 IPR003676 GO:0009733
Alju08g1534 192 Pfam Auxin responsive protein 61 145 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1534 Alju-ChrAlju08 11997220 11998228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1534 51 189 Calmodulin-binding Proteins AT4G34750 50.336 1.64e-41 135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g1534 08 11997220 11998228 Alju08g1534 08 11997220 11998228 ECH