Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1533 ATGAGCTGTAGCGACTACTATGGCACTCACTCCCCTCGGTGATACCACTGCTTGCCTACCACTTACCTCCTCCACCTTCCCCGTCTCCGTCTCCGTCTCCGACTCTCTCTCACTCTCTCTAGGAAACCTCACGGCCCAATCCTTCGAAGCACTTCCATTGTAGCAGAATTTACTTCTCTTGTATTCACTCGCACTTTCTCTTCACTTCCCTCTTTTCTCTGATTTTTTAATGCGATTCAGATGGACCGTCGCTGGCCCTGGAAGAAAAAATCATCGGATAAGACAGTGCTTGAGAAAGCAGCTGCTGCATTGGACTCTGCTGCTGGTGGTGCTCAGGGCGGTCAGGATAATTACAAGAAACCAAACTATGTGCAAATTTCTGTGGAGTCATATTCACATCTGACTAGCTTGGAGGACCAAGTGAAGACATTCGAGGAAAAAGTTCAGGTACTGGAAGATGAGGTCAAAGAATTGAATGAAAAGCTGTCAGTGGCAAACTCAGAGATAACTACCAAGGAAAGCTTAGTAAAGCAACATGCTAAAGTGGCTGAAGAAGCTGTCTCAGGCTGGGAAAAGGCAGAAGCGGAAGCTTTGGCGTTGAAGAATCATCTAGAATCTGTCACACTCTCAAAGCTCACTGCTGAGGATCGGGCATCACATTTAGATGGTGCTCTTAAGGAGTGTATGCGACAGATAAGAAACCTGAAGGAAGAACACGAGCAGAAAATACAGGAAGTTGCTCTCACTAAAACCAGGCAATTAGATAAAATGAAGGGTGAGCTTGACGCAAAGATAGTTAACTTAGAACAGGAACTTCTTAGGTCTGCTGCTGAAAATGGGGCTCTTTCAAGGTCTTTACAGGAGCGCTCTAACATGCTAATCAAAATTAGCGAAGAAAAGGCTCAGGCTGAAGCTGATATTGAGCTTTTGAAGGGCAATATAGAATCATGTGAAAGGGAAATCAATTCACTGAAGTATGAACTTCATGTTGTTTCGAAGGAGCTGGAAATTCGTAATGAAGAAAAGAACATGAGTATGAGGTCTGCAGAAGCTGCTAACAGGCAGCATGCAGAGGGGGTTAAAAAAATTGCAAAGTTAGAGGCTGAATGCCAAAGATTACGAGGACTGGTGCGCAAAAAGTTACCTGGTCCTGCTGCACTTGCACAAATGAAGATGGAAGTTGAGAATCTTGGCCGAGACTTTGGAGAAACTCGATCAAGGAGGTCTTCCATTAAGCCTGCTAGTCCTCATTTGTCCCCATCATCCGATTTCTCCCTAGAGAATATTCAGAAATTTCAGAAGGAGAATGAATTTCTCACTGAGCGTTTATTGGCAATGGAAGAAGAAACAAAGATGCTCAAAGAAGCTTTGGCAAAACGTAACAGTGAACTGCAGGCCTCAAGGAGCATGTGTGCTAAAACTCTGAGCAAACTTCAAAGCTTGGGAGCACAACTTCAGCCAGTTGACCAGCATAAAGGATTTCCAAAATCCATCAGCCAGATAACCCATGAAAGTATTTATGGTCAAAATGCAAGCAATGCACCAAGCTTAACCTCCATGTCTGAAGATGGAAATGATGATGTCGGAAAATGTGCTGAGTCTTTGTCTACAACATCAATCTCGGAAGTATCCCAATCCCAAAAAGAAAAGAATATTGAGAAATGTAGCATATCTGAGGCCACTAATAAGTTGGAACTGATGGATGACTTTCTAGAGGTGGAGAAGTTGGCCTGTCTATCAAATGATTCCAATGGCTCTATTTCAATTTCTTCAAGCAATGCAACTGAAATTGTGATCAACCATGTATCAGAAGTCAATACTTGCATCAATGGTTCCTCTGTAAAGCAGAGTGATTTGAATCCATTACCCAATCAACTGTCTTCTGGTGAAGTGTTGTCATCCCCTGATCTCCAATCTGATGTTAATTACTTGTCACTGACTGAGCTTCGATCAAGAATTTTGCAGGTCTTTGAGTCCATGTCTCGCAATGCTGATATAGGAAATATCCTTGAAGATATTAAGCATATTTTGGAAGATTCACGTGATACTTCCAAAAACCAATCTGTTGAATGCATACCCCAGGATGTACATCTTGAAAAGGAAATCATTTCATCAAAGCAAACATCAGAACACATGCAGATGACCACAGACTTGGTAGCTGCAATTTCTTGTATTCACGACTTTGTGCTGTTCCTTGGTAGAGAAGCAATGTCAGTTCATGACATTTCTGCTGATGGAGGAGTGAAGTTAAAGATTGAGGAATTTTCTCACACCTTTAGTAAAGTTATATGCAATGAAGCAACTTTGCCGCAGTTTGTTTTTGATTTATCATATGTATTAGCTAAGGCCAGTGAATTCAGATTTAATGTCCTTGGCTACAAGGGTACAGAATCTGAAACTAACAGTCCTGATTGCATTGACAAGATTGCTTTGCCAGAAAATAAGATAGTTCAAAACAGTCCGTTAGGAGAAAGATATCCAAATGGATGTTCCCCTATTCTTAATCCTTGTGCTGACCCTCAGGTACCTGATGATGGAAATTTGATCTCTACCTATGAATCAAACGGTACTTCACACCAATTCTCAGTGGATAAGTTTGAAGAATTGAAATTAGAGAAAGAGAAGACAGCAATGGATCTGGCAAGATGCACTGAAACTCTTGAGTCGACCAAGACTCAATTACAAGAGACTGAGCAACTTTTGGCAGAAGTGAAATCACAATTAGCCTCTTCTCAAAGATCAAACAGCTTGTCTGAGACGCAGCTGAAATGTATGGCAGAGTCTTACAGGACCCTTGAAACACGTGCACAAGAGTTAGAAACTGAGCTGAATCTTCTGCGAGTTAAGACAGAAACTCTGGAGAATGAACTTCAAGATGAAAAGAGGAGCCGTGAAGATGCTGTGGCCAAGTGCATGGACCTAGAAGAGCAATTGCAAAGCTATGAGAGCTCAGCAGCTGATAATGACCTCAAGACAAAGCAGGAGAGAGATTTGGCAGCTGCAGCAGAAAAACTAGCCGAGTGTCAGGAAACAATATTTCTCCTTGGCAAGCAGCTTCAAACTCTACGCCCTCAAATGGAGCAGGGTGGATCTCCTTACAGTGAGAGAAGTTCAAAGGTTGATGAAGGGCTTACAGAGGAGGAGCCTACTATTAGTAACCCAAATTTGCAAGACTTGGATGAGATGGACAGTGCTAGTTCAGCATTTGTGCAAAGATTGGGTCCCGAGTCCCCCTTGTATTTCTCCAACAGCCTGTGTCCATCTGATAATGAAGCAAACCTTGCCACCATATCTCCAGCAAAGCATCCAAAACACAGGCCCACCAAATCAGCCTCCTCCTCTGTTTCTTCCGCCCCCACACCGGAGAAACTCGCACATGCCCATGCACGAGGATTTAGTAGATTCTTTTCATCGAAAGGAAAAAATGGTCGCTAA 3435 0.4277 MSCSDYYGTHSPRXYHCLPTTYLLHLPRLRLRLRLSLTLSRKPHGPILRSTSIVAEFTSLVFTRTFSSLPSFLXFFNAIQMDRRWPWKKKSSDKTVLEKAAAALDSAAGGAQGGQDNYKKPNYVQISVESYSHLTSLEDQVKTFEEKVQVLEDEVKELNEKLSVANSEITTKESLVKQHAKVAEEAVSGWEKAEAEALALKNHLESVTLSKLTAEDRASHLDGALKECMRQIRNLKEEHEQKIQEVALTKTRQLDKMKGELDAKIVNLEQELLRSAAENGALSRSLQERSNMLIKISEEKAQAEADIELLKGNIESCEREINSLKYELHVVSKELEIRNEEKNMSMRSAEAANRQHAEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKMEVENLGRDFGETRSRRSSIKPASPHLSPSSDFSLENIQKFQKENEFLTERLLAMEEETKMLKEALAKRNSELQASRSMCAKTLSKLQSLGAQLQPVDQHKGFPKSISQITHESIYGQNASNAPSLTSMSEDGNDDVGKCAESLSTTSISEVSQSQKEKNIEKCSISEATNKLELMDDFLEVEKLACLSNDSNGSISISSSNATEIVINHVSEVNTCINGSSVKQSDLNPLPNQLSSGEVLSSPDLQSDVNYLSLTELRSRILQVFESMSRNADIGNILEDIKHILEDSRDTSKNQSVECIPQDVHLEKEIISSKQTSEHMQMTTDLVAAISCIHDFVLFLGREAMSVHDISADGGVKLKIEEFSHTFSKVICNEATLPQFVFDLSYVLAKASEFRFNVLGYKGTESETNSPDCIDKIALPENKIVQNSPLGERYPNGCSPILNPCADPQVPDDGNLISTYESNGTSHQFSVDKFEELKLEKEKTAMDLARCTETLESTKTQLQETEQLLAEVKSQLASSQRSNSLSETQLKCMAESYRTLETRAQELETELNLLRVKTETLENELQDEKRSREDAVAKCMDLEEQLQSYESSAADNDLKTKQERDLAAAAEKLAECQETIFLLGKQLQTLRPQMEQGGSPYSERSSKVDEGLTEEEPTISNPNLQDLDEMDSASSAFVQRLGPESPLYFSNSLCPSDNEANLATISPAKHPKHRPTKSASSSVSSAPTPEKLAHAHARGFSRFFSSKGKNGR 1144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1533 1144 Coils Coil 880 914 - -
Alju08g1533 1144 Coils Coil 293 369 - -
Alju08g1533 1144 Coils Coil 922 984 - -
Alju08g1533 1144 Coils Coil 991 1011 - -
Alju08g1533 1144 Coils Coil 429 456 - -
Alju08g1533 1144 Coils Coil 134 175 - -
Alju08g1533 1144 MobiDBLite consensus disorder prediction 1023 1144 - -
Alju08g1533 1144 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 81 1139 - -
Alju08g1533 1144 MobiDBLite consensus disorder prediction 1048 1064 - -
Alju08g1533 1144 MobiDBLite consensus disorder prediction 510 531 - -
Alju08g1533 1144 Pfam Filament-like plant protein, long coiled-coil 172 1027 IPR008587 -
Alju08g1533 1144 Coils Coil 218 278 - -
Alju08g1533 1144 MobiDBLite consensus disorder prediction 1077 1095 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1533 Alju-ChrAlju08 11973017 11980626 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2922 07 54306886 54313053 Alju08g1533 08 11973017 11980626 CCT
Alju08g1533 08 11973017 11980626 Alju08g1533 08 11973017 11980626 ECH