Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Alju08g1512 | ATGCCTGGGAACGTTGATTGCTTGGGTCATTGTACAACAGCCAAGGCCGGCATAGCTGGTTCATTGTACTCTGTTTCTATCTACATTTTTTCCTCTTTTGCACTTTGCAAAACGTTGTCAAACCAATGGACTTGGCTTGACAAGGTCGCATGCATCATCTTCATCTTTGAAGTTTCTTCTTCATTTGTCAAACCTTATAGTTTCATTCAAGATCGGTTAATCGACAAAGAAAGAAGGATCCAACACAAAGAACAGTGTGCAGAGAGGTTAGCAGCAGAAGATGAAAGCATCGATAAAGACAGTGAGGTCCAGTACTCTGATCAAGCAGTATTAGCAAATCTTGATTGGGGTATTGAAGCCCTTGAAGAAGCTATCAATACCTATAACATGGAAACTAAGATTGCTCGCTTAGATTATGCTGAGAAGATGTTACAAGTATGTGCCATGTTGAATCCTGATCGGAAAACCGCCGGAGTTCCAAATTTCTACCTCTCAGCTTGGGCCCACCTTAATCTCTCTTATCTATGGAAGTTGAAGAACAATGTTCAAAACTCAATTTTTCATGCTCTTGAGATGTTCATCGTTGACCCTTTTTTCTCAAGGATTGATTTTGCACCAGAGCTTTGGAAAGATCTATTTCTTCCACACATGAGTTCCATTGTTGGTTGGTATTCAGAGGAGAGGCATAGGCTCATGATGGAAGTTATACCTGACTCTTCAGATTTGTCTTTTACAGCTGATTTTGATCAGTTCTTCAATGAGTCTTTGATATATACTATGAGGCCACATCAAGCAGAGAAGCTGCAGAATCTGGAGAAGCTCTATGGAGAGTCATTGGACAAAAACACAATACTTTATGCAAAGTATTATAAGGATTGTATCAGCCCTGATTCAACAACCTCTAGCAAGAAGGCTCCGATGTTACCGATCGCCGAGCCACCGATGACTCCTCTGCATGAGTTGAGTTGCTCCATTCCTGATTATGTGAAATTTGGTCCTATATTGCCTAAAAGTGCTGGGTTTTCTCCTGTTCTAAAAGCTAAAGCTGGTGCAAATGAAACTATCAGAGGGAATGTCACTTCCAGCCATTCACAAAAGGCAGAGAAGTCATCATCTTCATGGAGTGCTAAGGAGAAAGCCATTGGAGAGTATGAAGATTCAGATGATGACCTTGATGATTCATACATTGATCGAGATAGAAAAACCCCAAATCTATTGAAGGGTGAGGATATTGAGCCAAAAGTACATCAATTGAACCAGAAGAATCAAATATATTCTCCTCCTGTTTTCTCTCCTTTAAATTCTCCAAGAGCAACTCCTAAAACTTCATCTTCACTTCATGCCATGCACACTAAAGGAGAACCCAAATCTCTGCGCTTATTGTCTAGGCGTTTTTCAGACACAAGTATTTCCAACTCTTCACCAATATCTCCACACATGAGTACTGATCACAGCATCAGTTCAGAAGATTCTGATAACGAAATAATGGGCGTGAAGAACAGTAAGAGGAAAAACCATTACTCAGAAAATATTATGAATCATGAGAAAGACAATATTCTCTCATTCAATGACAATTCTCTTTATGAGAGCCATGAGGGAAATAGCAGCTGTAGTTTATCACTAAAATCAGAGAAGACTACTGTTCAATCAAGACCTCCCAAAGATTTTGTTTGCCCTATCACAGGCCAGATATTTAGTGATCCAGTCACCCTTGAAACAGGTCAGACATATGAAAGAAAAGCAATTCAGGAGTGGCTCAAAACTGGAAATACAACATGTCCGATTACGCGGCAATCTATCTCGGCTAGCATACTACCTAAAACAAACTATGTCTTGAAGAGATTGATAACTTCATGGAAAGAACAACATCCAGAACTAGCTCAGGAGTTCTCAAATTCTTCTTCTGTCAAAGATATCCCAGTGGTCTCTAGAATGCACAAAAAAGCTGACTCACCAGCTCATAAGAGTGCAAATGATTATATTAGACAAAGGAGCAAAAGATTAATGCAGGTCTCTGTAGCATCATCACCAACAAGTGTGATATCTCAAGCTGAAGTTGAAACAATCATAAATTGTTTGAAACCTCGTATTTCAAGTCTCTGCACATCAGAAGACTTGCAAGAATGTGAGGATTCTGTGTTGGCGATCGCTGGATTATGGAAGGACTCAAAGAATGATCCTCATATTCATTCTTATTTATCAAATCCAACTGTTATAAATGGTTTAGTGGAAATACTTTCAGCTTCTCTAAATAGAGAAGTTCTGAGAACATCAATTTATATCCTGTCTGAGCTAATTTTTGCAGATGATAGAGTTGGAGAAATACTCTGCAATGTTGATTCTGATTTCGACTGCTTGGCTACTCTGCTTAAGAATGGTTTAATTGAGGCTGCTGTTCTAATTTACCAACTGAGGCCAGTTTACGATCAACTCTCTGCTCATGAACTAATACCCTCCATTGTCCAGCTGATCCAGAACAAAAATGAGGAGTTTGATGATCTTCGGTTCCTTATCGATCCCAAAGATGCAGCTGTGGCGATTCTTGAGCAGATTTTATTAGGTGGGAATGAATATAGCAGGTCCCTCAATGCTTTGAGTGTTATTTCAGCAAATGGAATTCCAATCTTGGTTAAGTATATGGAAAGGATGGAAGGAAGGAGGTCTGTTGTTTCCATTCTTCTGTGCTGTATGCAAGCTGACAGAAGTTGCAGGAGCTTAATTGCCAACAGAATTGAATTATCTCCTGTTCTTGAATTATTTCATTCTGGAAATGACAGTGTCAGAGGAATATGTGTGGAGTTTCTCTCTCAGCTTGTTCAATTGCATAGGAGGACACTGTGCAACAAGTTATTGCAAATTATCAAGGATGAGGGAGCATTTAGTACCATGCATACATTTCTTGTGTATCTTCAGATGGCTCCTATGGAGCATCAACTTGCAGTTGCTAGTCTTCTGCTTCAGCTTGATCTCCTGGTTGAGCCACGAAAGATGAGCATTTTCAGGGAAGAAGCTGTAGAGACCCTGATAGAATCACTTTGGCGAAAGGACTTCTCAAACACTCAGACGAAGGCTTTAGATGCTTTACTGCTTCTTATTGGGCATCTCACTTCTTCAGGAAAGTCATACACTGAAGCCTGGCTGCTTAAGATTGCAGGGTTTGACCAACCTTACAATTCTCTAATGAAAGTTGAGCAGTTGGAAAAACATGACAATGATCAGGTAGAATCAGTGGAGGATGAAGAAAATGCTATGAGTTCTTGGCAGAAAAGGGTGGCTTTTGTTCTTTGCAACCATGAAAAGGGTTCCATATTTAAAGCTCTAGAAGAATGTCTCAAGAGTACTTCCCTAGAGACAGCAAAATCATGTCTTGTCGTCGCCACGTGGCTCACACACATGCTCTCAACCATTCCTGATACAGGTATTAGGGATGTTGCTAGAACATCCTTGCTTGAGGAACTTATAAACGTCCTCCAATCATCCAAGAACCTCGAGGAAATGATCCTAGCTACCCTTGCTTTGAAGAACTTTATCAGTGATCCTATTGCTCTTGAAGCACTAGGAACTTATGCCAAAAGCATCTATAAAACACTGAGAAAGTTGAAGAAATATTCTGTGGTGGCTGCTGATATTATGAAAGCCTTACTGAACTTAAAATCCATTGATGTGACAGCATTGTGGAGTTGCAAGGAAGTCGTTGAGTTAGATTTGAGCTCAAATGGAGAGGTACTTTCTTTGCTTTATGTGAATGGCCGGGTCTTGAGTGGACACTCTGATGGAACCATGAAAGTGTGGGATGCCAATAACAGAGTATTAAGATTGGTTCAAGAAACTCGTGAACACAATAAAGGTGTAACATGTCTCTACTCTTCAGGCGATAAACTGTACAGTGGCTCCTTAGACAAAACCATCCGGGTATGGACGATGAAATGTAACGAGATTCACTGTGTTCAAGTTTATGATATCAAAGAGGCTGTGTATGAGTTGATAGCAAATGATAAATTGGCATGCTATGTAACTCAAGGAACTGGAGCTAAGGTGTATAATTGGTCGGAGCCTCCAAAGCTTATTAATTTCAACAAACATGTGAAGTGCCTCGCAATGTCTGCGAACAAACTATATTGTGGTTGCTCTGGTTACATTGTTCTGGAGGTAGACTTGTCAAATTATACATCAACCACAATTTTATCCGGGACAAGAAAATTGCTGGGAAAACAATTCATTCACTCCCTTCTAATTTATGATGATTTTCTTATCGCTGGTGGTTCTTTAGTTGATTCGACCGCAGGAAAGATATTGTCTTTGTCGTCAAAAGAAGTGGTGGGGTCACTCTCAACAGGCCTAGATATCCACCGTATGGCCATGAACAGTGACTTTGTATTTACCGGAACTAAATGTGGGACAATTGAGGTATGGCTAAAATATAAGCTAAGCAGGGTTGCTTCCATCAAAATGGCTGGTGGTCACACAAAAATCACGTCACTGGCTTCGGATTCAGATGGTGTGATGCTTTTTGTTGGTTCCTCTGACGGCAAGATCCAGGTTGGTTCATATTTGCTTGGGCTTTGGATTAGATGCTATCTGGGGACATAG | 4590 | 0.4028 | MPGNVDCLGHCTTAKAGIAGSLYSVSIYIFSSFALCKTLSNQWTWLDKVACIIFIFEVSSSFVKPYSFIQDRLIDKERRIQHKEQCAERLAAEDESIDKDSEVQYSDQAVLANLDWGIEALEEAINTYNMETKIARLDYAEKMLQVCAMLNPDRKTAGVPNFYLSAWAHLNLSYLWKLKNNVQNSIFHALEMFIVDPFFSRIDFAPELWKDLFLPHMSSIVGWYSEERHRLMMEVIPDSSDLSFTADFDQFFNESLIYTMRPHQAEKLQNLEKLYGESLDKNTILYAKYYKDCISPDSTTSSKKAPMLPIAEPPMTPLHELSCSIPDYVKFGPILPKSAGFSPVLKAKAGANETIRGNVTSSHSQKAEKSSSSWSAKEKAIGEYEDSDDDLDDSYIDRDRKTPNLLKGEDIEPKVHQLNQKNQIYSPPVFSPLNSPRATPKTSSSLHAMHTKGEPKSLRLLSRRFSDTSISNSSPISPHMSTDHSISSEDSDNEIMGVKNSKRKNHYSENIMNHEKDNILSFNDNSLYESHEGNSSCSLSLKSEKTTVQSRPPKDFVCPITGQIFSDPVTLETGQTYERKAIQEWLKTGNTTCPITRQSISASILPKTNYVLKRLITSWKEQHPELAQEFSNSSSVKDIPVVSRMHKKADSPAHKSANDYIRQRSKRLMQVSVASSPTSVISQAEVETIINCLKPRISSLCTSEDLQECEDSVLAIAGLWKDSKNDPHIHSYLSNPTVINGLVEILSASLNREVLRTSIYILSELIFADDRVGEILCNVDSDFDCLATLLKNGLIEAAVLIYQLRPVYDQLSAHELIPSIVQLIQNKNEEFDDLRFLIDPKDAAVAILEQILLGGNEYSRSLNALSVISANGIPILVKYMERMEGRRSVVSILLCCMQADRSCRSLIANRIELSPVLELFHSGNDSVRGICVEFLSQLVQLHRRTLCNKLLQIIKDEGAFSTMHTFLVYLQMAPMEHQLAVASLLLQLDLLVEPRKMSIFREEAVETLIESLWRKDFSNTQTKALDALLLLIGHLTSSGKSYTEAWLLKIAGFDQPYNSLMKVEQLEKHDNDQVESVEDEENAMSSWQKRVAFVLCNHEKGSIFKALEECLKSTSLETAKSCLVVATWLTHMLSTIPDTGIRDVARTSLLEELINVLQSSKNLEEMILATLALKNFISDPIALEALGTYAKSIYKTLRKLKKYSVVAADIMKALLNLKSIDVTALWSCKEVVELDLSSNGEVLSLLYVNGRVLSGHSDGTMKVWDANNRVLRLVQETREHNKGVTCLYSSGDKLYSGSLDKTIRVWTMKCNEIHCVQVYDIKEAVYELIANDKLACYVTQGTGAKVYNWSEPPKLINFNKHVKCLAMSANKLYCGCSGYIVLEVDLSNYTSTTILSGTRKLLGKQFIHSLLIYDDFLIAGGSLVDSTAGKILSLSSKEVVGSLSTGLDIHRMAMNSDFVFTGTKCGTIEVWLKYKLSRVASIKMAGGHTKITSLASDSDGVMLFVGSSDGKIQVGSYLLGLWIRCYLGT | 1529 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Alju08g1512 | 1529 | Gene3D | - | 1221 | 1515 | IPR015943 | GO:0005515 | |
Alju08g1512 | 1529 | MobiDBLite | consensus disorder prediction | 468 | 492 | - | - | |
Alju08g1512 | 1529 | CDD | RING-Ubox_PUB | 553 | 605 | IPR045210 | - | |
Alju08g1512 | 1529 | MobiDBLite | consensus disorder prediction | 425 | 450 | - | - | |
Alju08g1512 | 1529 | MobiDBLite | consensus disorder prediction | 468 | 484 | - | - | |
Alju08g1512 | 1529 | Pfam | WD domain, G-beta repeat | 1486 | 1513 | IPR001680 | GO:0005515 | |
Alju08g1512 | 1529 | Pfam | WD domain, G-beta repeat | 1274 | 1306 | IPR001680 | GO:0005515 | |
Alju08g1512 | 1529 | SUPERFAMILY | RING/U-box | 542 | 624 | - | - | |
Alju08g1512 | 1529 | MobiDBLite | consensus disorder prediction | 356 | 377 | - | - | |
Alju08g1512 | 1529 | SUPERFAMILY | WD40 repeat-like | 1237 | 1514 | IPR036322 | GO:0005515 | |
Alju08g1512 | 1529 | Gene3D | - | 694 | 969 | IPR011989 | - | |
Alju08g1512 | 1529 | MobiDBLite | consensus disorder prediction | 425 | 451 | - | - | |
Alju08g1512 | 1529 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 535 | 636 | IPR013083 | - | |
Alju08g1512 | 1529 | MobiDBLite | consensus disorder prediction | 356 | 401 | - | - | |
Alju08g1512 | 1529 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 1277 | 1309 | IPR001680 | GO:0005515 | |
Alju08g1512 | 1529 | PANTHER | RING-TYPE E3 UBIQUITIN TRANSFERASE | 67 | 1514 | - | - | |
Alju08g1512 | 1529 | SUPERFAMILY | ARM repeat | 656 | 1217 | IPR016024 | - | |
Alju08g1512 | 1529 | SMART | WD40_4 | 1270 | 1307 | IPR001680 | GO:0005515 | |
Alju08g1512 | 1529 | SMART | WD40_4 | 1227 | 1265 | IPR001680 | GO:0005515 | |
Alju08g1512 | 1529 | SMART | WD40_4 | 1436 | 1472 | IPR001680 | GO:0005515 | |
Alju08g1512 | 1529 | SMART | WD40_4 | 1475 | 1516 | IPR001680 | GO:0005515 | |
Alju08g1512 | 1529 | SMART | Ubox_2 | 555 | 619 | IPR003613 | GO:0004842|GO:0016567 | |
Alju08g1512 | 1529 | ProSiteProfiles | U-box domain profile. | 551 | 626 | IPR003613 | GO:0004842|GO:0016567 | |
Alju08g1512 | 1529 | Pfam | U-box domain | 553 | 623 | IPR003613 | GO:0004842|GO:0016567 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Alju08g1512 | Alju-ChrAlju08 | 11822625 | 11829925 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Alju08g1512 | 534 | 938 | U-box Gene Family | AT1G23030 | 26.139 | 3.67e-20 | 94.7 |