LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju08g1500	ATGGTTGTAGTACGTGGCAGGGAGAGAGTGTGGGAGGTGTTAGGGGTGGTGATAGTACTGTTAGGGTGGAAAACGGAGGGGCTGGTGAAGCTGCCGGAAAATGTAACGGTGCCGGCGTTGTTGGTGCTCGGAGATTCCATAATGGATACGGGGAACAACAACTACAATCCTACGACGTTGGCTCGATGCAATTACAGGCCTTATGGCAAGGACTTCGAAGGAGGTATCCCCACCGGCCGATTCGGCAACGGAAAGGTTCCCTCCGATCTCATTGTGGAAGAATTGGGAATCAAAGAACTGCTGCCTGCATATTTGGATCCGAATCTGCAACCTCAGGATCTGCCGACAGGTGTGTGTTTTGCATCGGGTGGCTCCGGATATGATCCTTTGACCTCCAAATTAGCGTCCGCAATACCGCTTCCTGATCAAGTAGAACTGCTCCGACAATACAAGCAGAAGCTAAAGGCACTTGTTGGAGAAGACAGAACCAATTTCATCATATCAAACAGCGTCGTTTTTGTGGTAGCAGGAAGTAATGATATTTCCAACACTTACTTCCTGTCTCACTCTAGACAGGTCCAATACGATGTTCCTGCTTACACTGACCTCATGGTCACTTCTGCTTCTCACTTAGTAAAGGAATTATATGAAGCTGGGGTAAGAAGAATCGGAGTGTTCAGTGCGCCACCAATAGGGTGTGTTCCATTTCAAAGAACATTAGCTGGAGGAGTAGAAAGAAAGTGTGTAGACACATACAATGAGGCAGTTCAGTTATTTAATTCCAAACTCTCACAAGAGCTGGGTTCTCTTAATCGCCAATTACTCGGCAGTAAAATTGTTTACGTTGATGTTTACAACCCTCTACTTGATGTCATCGTCAATTACCAGCAATATGGTTTCAAAGTTGGGGACCGAGGATGTTGTGGAATTAAAGGGGAAATAGAGGTAGCAGAGTTATGCAATCATCTTCAACCGACATGCGCCGATGATTCAGAATATGTATTTTGGGATAGTTTTCATCCAACTGAAACTGCTTACAGAAAGCTCATACCTCTCATCCTTGGTAAAAGTCTTTACCAATTCTTCTGA	1089	0.4527	MVVVRGRERVWEVLGVVIVLLGWKTEGLVKLPENVTVPALLVLGDSIMDTGNNNYNPTTLARCNYRPYGKDFEGGIPTGRFGNGKVPSDLIVEELGIKELLPAYLDPNLQPQDLPTGVCFASGGSGYDPLTSKLASAIPLPDQVELLRQYKQKLKALVGEDRTNFIISNSVVFVVAGSNDISNTYFLSHSRQVQYDVPAYTDLMVTSASHLVKELYEAGVRRIGVFSAPPIGCVPFQRTLAGGVERKCVDTYNEAVQLFNSKLSQELGSLNRQLLGSKIVYVDVYNPLLDVIVNYQQYGFKVGDRGCCGIKGEIEVAELCNHLQPTCADDSEYVFWDSFHPTETAYRKLIPLILGKSLYQFF	362

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju08g1500	362	SUPERFAMILY	SGNH hydrolase	167	354	-	-
	Alju08g1500	362	Gene3D	SGNH hydrolase	29	355	IPR036514	-
	Alju08g1500	362	FunFam	GDSL esterase/lipase APG	29	358	-	-
	Alju08g1500	362	ProSitePatterns	Lipolytic enzymes "G-D-S-L" family, serine active site.	40	51	IPR008265	GO:0006629\|GO:0016298
	Alju08g1500	362	PANTHER	GDSL ESTERASE/LIPASE EXL3	23	350	-	-
	Alju08g1500	362	Pfam	GDSL-like Lipase/Acylhydrolase	41	349	IPR001087	GO:0016788
	Alju08g1500	362	CDD	SGNH_plant_lipase_like	38	357	IPR035669	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju08g1500	Alju-ChrAlju08	11659984	11663921	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju08g1500	34	349	Pollen Coat Proteome	AT1G75910	42.633	2.06e-79	245