Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1499 ATGGTTTCTTCGCTGTTCCCTTCACGGGATTCCTATGCATCGCGGCCTTCTTTAGCCGTTTCCTCTCTCTTTCTTTCTGTAGGCGTATCTGCAAGCCTGAAACTTCAACGTGAGTTAGTTGCCATGGAAGAAGTGGAGCTTGCCTCTCATAATTCGCATTCAGAACAAAGCCAACAATCTAAAGAATCAAGCAAACCAGAGAGTGTTTCCTTCTTTGGCTTGTTCTCTGCTGCTGATACAATTGACTATGGCTTGATGTTCTTGGGAAGTGTTGGTGCGAGTGTTCATGGAGCTGCTCTTCCTGTGTTCTTCATCTTGTTCGGTCGTATGATTGATTCTTTAGGACATCTTTCTAAGCATCCTCATAAGTTGTCGTCACGCATTTCTGAGAATGCATTGTACTTGGTCTATCTTGGACTGGTTGTTCTGGTATCAGCTTGGATGGGGGTTGCATTTTGGATGCAAACAGGGGAGAGGCAAACAGCTCGTTTGCGTTTTAAGTATCTACAATCAGTTCTAAAAAAGGATATTAATTTCTTTGACAATGAAGCAAGAGACGCCAACATCATTTTCCACATTTCAAGTGACGCTATATTGGTACAAGATGCAATAGGTGACAAGACAGGCCATGCTATACGTTACCTTTCACAATTCATTGTTGGATTTGCCATTGGATTTACTTCAGTATGGCAGCTTACACTGCTCACATTGGCTGTGGTTCCATTAATAGCTGTAGCTGGAGGAGCTTATACTATGACCATGTCTACCTTGTCAGAAAAAGGCGAAGCAGCTTACGCTGAAGCTGGGAAAGTGGCAGAAGAGGTAATTTCTCAAGTTCGTACGGTTTACTCGTTTGTGGGAGAAGATAAAGCAGTTGCCTCATACTCACAATCACTTGACAATGGTCTGAAGCTAGGAAAGAAGAGTGGTTTTGCAAAAGGAATTGGGGTAGGCTTAACATATGGACTCTTGTTTTGTGCTTGGGCATTGCTTCTTTGGTACGCAAGCATACTTGTGAGCCATCATAAAACAAATGGAGGGAAAGCCTTCACAACTATCATTAATGTCATCTTTAGTGGATTTGCTCTTGGCCAAGCTGCGCCTAATCTCGCAGCGATAGCTAAAGGGCGCGCGGCTGCAGCCAATATCATGAACATGATTGCATCTGTTTCAAGCACGTCAAAGAATTTTGAGAATGGGATTGTTTTGCCACAAGTTGTAGGGAAAATTGACTTTTGTGAGGTCTGCTTTTCTTACCCCTCAAGATCAAACTTGGTGTTTGAAAATTTGACCTTCACAGTAACTTCTGGGAAGACTATCGCAGTTGTTGGTCCTAGTGGTTCAGGAAAGAGCACTATCATTTCTATGATTCAAAGATTTTATGATCCCACTTCAGGTAAGATACTATTGGATGGACATGACCTGAGGAGTCTTCGATTGAAATGGTGGAGGAAACAAATGGGCTTGGTTAGCCAAGAACCGTTGCTATTTGCCACAACAATATCTGAAAATATTTTACTTGGAAAAGAGGATGCAAACATGGATCAAATCATACATGCAGCAAAAGCTGCAAACGCTCATTCTTTTATTGAAGGCTTACCTGATGGTTATCTGACTCCGGTTGGAGAAGGTGGTACACAACTTTCAGGAGGGCAGAAACAGAGAATAGCAATAGCAAGAGCAGTGCTCAGAAACCCAAAAGTATTACTTCTAGACGAGGCAACTAGTGCTCTTGATGCTGAATCAGAATTAATAGTTCAGCAGGCCCTGGAAAAATTAATGTCAAATAGGACTACAATCATCGTCGCCCACCGGTTATCAACTATTCGCAACGTGGATACGATCGTGGTGTTGAAGAATGGCCTGGTTGTAGAAAGTGGTACTCATTCAGAATTGATGTCAAAAAATGGAGACTATGTGCATTTAGTGAGTTTGCAAGCAGCAGCATCAGAAAACAACAACCCCGTGACGGGTTCTTCTAGTGCATTAATATCTCGATCAGGAAGTTCAAGACATTCAAGTTTCCGGGAAGCTTCAGATAACAACCAAATATGCCTAGATGATGAATTGATGAAGTCCATTTCAACAAGAGAACCTCATCACCATCAACCTAGTGAAGACCAAAAGTCCATTCCTTCAATCTTAGACTTGCTAAAACTAAATGCCCCTGAATGGCCTTATGCAGTACTTGGATCAGTGGGTGCAATTATGGCAGGCATGGAAGCTCCTCTTTTTGCTCTTGGTATCACACATATTTTGACTGCATTTTACTCACCTCATGGTTCTAAAATCAAGCAAGAGGTTGATCGTATAGCCCTTGTATTTGTCGGAGTTGCTGCTATTACTATACCTATTTATCTGCTGCAACATTACTTCTATACATTGATGGGAGAGCGTCTCACAGCCCGTGTACGCTTATTAATGTTTTCAGCTATCCTGACCAATGAAATTGCATGGTTCGACACGGATGAGAACAACACTGGATCATTAACAGCTATGCTAGCAGCAGATGCAACATTAGTAAGAAGTGCTTTGGCTGACAGACTCTCCACTATTGTACAAAATGTAGCTCTCACTGTAACGGCATTTGTTATTTCCTTTACACTGAGTTGGAAACTAACAGCCGTGGTTGCAGCTTGCTTGCCTCTTCTTATTGGAGCTTCTATCACTGAACAACTATTTCTCAAGGGGTTTGGAGGAGATTATAGTGCAGCCTACTCTAGAGCAACTTCTTTGGCACGTGAAGCTATCTCCAATATACGAACTGTTGCTGCTTTTGGTGCAGAAGATCGAATCTCACTCCAATTTGCCACTGAATTGAACAAACCTAACAAGCAAGCACTTTTAAGAGGCCATATCTCAGGCTTTGGTTATGGTGTGACGCAGTTACTTGCTTTCTGCTCTTATGCACTTGGCCTCTGGTATGCATCCATCTTGATCAAGCACAAAGAATCTCACTTTGGAGATATTATGAAGTCTTTTATGGTTTTAATCATCACAGCTCTGGCAATAGCAGAAACACTAGCTCTTACACCAGACATTGTCAAAGGATCTCAAGTTCTGGGGTCAGTTTTTGGTATTCTCCGAAGGAGAACATCAATCCCTCCCCACGAACCTAACTCAAAGATGATAACCGACATGAAAGGAGAGATAGAGTTCAAAAATGTACACTTTAGCTATCCAATGAGACGTGAAATCACCATTTTTGAGAACTTTAACCTTCAAGTTAAAGCAGGAAAGAGTCTTGCAGTAGTGGGGCCAAGTGGTTCTGGGAAGAGTACTGTGATCTCACTAGTCATGAGATTTTATGACCCAAATAATGGAAAGGTCTTAATCGATGGATATGATATTAAAAGCCTGAACTTGAGATCCTTAAGACTAAGAATAGGCCTGGTTCAACAAGAACCTGCATTATTCTCCACCACAATATATGAAAACATCAAGTATGGCAAAGAAGAGGCCTCAGAAATTGAGATAATAAAGGCAGCTAAAGCTGCAAATGCTCATGAATTTATCGTCAGAATGCCTCAAGGGTATGAAACCGAGGTAGGTGAAAGAGGAGTGCAATTATCAGGAGGCCAAAAACAGAGGCTTGCAATTGCTAGAGCTATTTTGAAAGACCCATCCATTCTCTTATTAGATGAAGCAACAAGTGCATTGGACACAGTTTCAGAGAGATTGGTCCAAGAGGCTTTGGAGAAGCTTCTGGAAGGAAGAACAACAATCTTGGTGGCTCACAGATTATTAACAGTTCGAAATGCTCACAATATTGCTGTGTTACAAAATGGTAAAGTGGCTGAAATGGGCAGCCATGAGAGGCTAATTGCTCAACCTCAAAGCATTTATAAGCAGCTGGTTAGTCTACAACAAGATAATAGTACTGACCAAGCAATGAATTGA 3900 0.4172 MVSSLFPSRDSYASRPSLAVSSLFLSVGVSASLKLQRELVAMEEVELASHNSHSEQSQQSKESSKPESVSFFGLFSAADTIDYGLMFLGSVGASVHGAALPVFFILFGRMIDSLGHLSKHPHKLSSRISENALYLVYLGLVVLVSAWMGVAFWMQTGERQTARLRFKYLQSVLKKDINFFDNEARDANIIFHISSDAILVQDAIGDKTGHAIRYLSQFIVGFAIGFTSVWQLTLLTLAVVPLIAVAGGAYTMTMSTLSEKGEAAYAEAGKVAEEVISQVRTVYSFVGEDKAVASYSQSLDNGLKLGKKSGFAKGIGVGLTYGLLFCAWALLLWYASILVSHHKTNGGKAFTTIINVIFSGFALGQAAPNLAAIAKGRAAAANIMNMIASVSSTSKNFENGIVLPQVVGKIDFCEVCFSYPSRSNLVFENLTFTVTSGKTIAVVGPSGSGKSTIISMIQRFYDPTSGKILLDGHDLRSLRLKWWRKQMGLVSQEPLLFATTISENILLGKEDANMDQIIHAAKAANAHSFIEGLPDGYLTPVGEGGTQLSGGQKQRIAIARAVLRNPKVLLLDEATSALDAESELIVQQALEKLMSNRTTIIVAHRLSTIRNVDTIVVLKNGLVVESGTHSELMSKNGDYVHLVSLQAAASENNNPVTGSSSALISRSGSSRHSSFREASDNNQICLDDELMKSISTREPHHHQPSEDQKSIPSILDLLKLNAPEWPYAVLGSVGAIMAGMEAPLFALGITHILTAFYSPHGSKIKQEVDRIALVFVGVAAITIPIYLLQHYFYTLMGERLTARVRLLMFSAILTNEIAWFDTDENNTGSLTAMLAADATLVRSALADRLSTIVQNVALTVTAFVISFTLSWKLTAVVAACLPLLIGASITEQLFLKGFGGDYSAAYSRATSLAREAISNIRTVAAFGAEDRISLQFATELNKPNKQALLRGHISGFGYGVTQLLAFCSYALGLWYASILIKHKESHFGDIMKSFMVLIITALAIAETLALTPDIVKGSQVLGSVFGILRRRTSIPPHEPNSKMITDMKGEIEFKNVHFSYPMRREITIFENFNLQVKAGKSLAVVGPSGSGKSTVISLVMRFYDPNNGKVLIDGYDIKSLNLRSLRLRIGLVQQEPALFSTTIYENIKYGKEEASEIEIIKAAKAANAHEFIVRMPQGYETEVGERGVQLSGGQKQRLAIARAILKDPSILLLDEATSALDTVSERLVQEALEKLLEGRTTILVAHRLLTVRNAHNIAVLQNGKVAEMGSHERLIAQPQSIYKQLVSLQQDNSTDQAMN 1299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1499 1299 Gene3D - 1041 1298 IPR027417 -
Alju08g1499 1299 CDD ABC_MTABC3_MDL1_MDL2 410 646 - -
Alju08g1499 1299 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1040 1289 IPR027417 -
Alju08g1499 1299 SMART AAA_5 436 622 IPR003593 GO:0016887
Alju08g1499 1299 SMART AAA_5 1078 1264 IPR003593 GO:0016887
Alju08g1499 1299 SUPERFAMILY ABC transporter transmembrane region 74 383 IPR036640 GO:0005524|GO:0016020
Alju08g1499 1299 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1051 1287 IPR003439 GO:0005524
Alju08g1499 1299 PANTHER ABC TRANSPORTER B FAMILY 53 782 IPR039421 -
Alju08g1499 1299 ProSitePatterns ABC transporters family signature. 1190 1204 IPR017871 GO:0005524|GO:0016887
Alju08g1499 1299 CDD ABC_MTABC3_MDL1_MDL2 1051 1289 - -
Alju08g1499 1299 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 410 645 IPR003439 GO:0005524
Alju08g1499 1299 FunFam ABC transporter B family member 1 73 402 - -
Alju08g1499 1299 FunFam ABC transporter B family member 4 400 653 - -
Alju08g1499 1299 FunFam ABC transporter B family member 4 1041 1296 - -
Alju08g1499 1299 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 400 646 IPR027417 -
Alju08g1499 1299 FunFam ABC transporter B family member 1 708 1017 - -
Alju08g1499 1299 Pfam ABC transporter transmembrane region 87 359 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju08g1499 1299 Pfam ABC transporter transmembrane region 733 1002 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju08g1499 1299 Pfam ABC transporter 1070 1218 IPR003439 GO:0005524
Alju08g1499 1299 ProSitePatterns ABC transporters family signature. 548 562 IPR017871 GO:0005524|GO:0016887
Alju08g1499 1299 Pfam ABC transporter 428 576 IPR003439 GO:0005524
Alju08g1499 1299 CDD ABC_6TM_Pgp_ABCB1_D2_like 718 1034 - -
Alju08g1499 1299 Gene3D - 408 677 IPR027417 -
Alju08g1499 1299 CDD ABC_6TM_Pgp_ABCB1_D1_like 86 370 - -
Alju08g1499 1299 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 729 1016 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju08g1499 1299 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 87 375 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju08g1499 1299 MobiDBLite consensus disorder prediction 651 678 - -
Alju08g1499 1299 Gene3D ABC transporter type 1, transmembrane domain 133 1024 IPR036640 GO:0005524|GO:0016020
Alju08g1499 1299 SUPERFAMILY ABC transporter transmembrane region 717 1029 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1499 Alju-ChrAlju08 11650442 11659314 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1499 61 1290 Calmodulin-binding Proteins AT2G36910 49.522 0.0 1216