Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1477 ATGACAGGAGATAAATCGGAAAACGTGGTCTACCTACACGGGGACCTTGATTTAAAAATTCTTGAGGCTCGATGTTTGCCGAACATGGATTTGTTATCGGAGCGTGTCAGTCAATTCTTTTCCCTCTTCAACTCCTGCACAACTTCAGTTTCCGGTAGACCGAGACGCCACCGTCACAGAAAAATCATTACCAGCGATCCTTACGTAAAAGTTTGCCTTGCCAAAGCTACGGTGGCTCGCACTCGGGTCATCTCTAACTCGCAGGATCCGACGTGGAATGAACATTTCAAAATCCCTCTCGCTCATCCCGTCTCGCAGGTCGAGTTCTACGTCAAGGACAACGACATATTCGGCGCTGATCTCATCGGAGTTGCAACCGTCTCCGCCGAGCGAATCTTATCTGGTGAACTCATCAGCGATTGGTTCCCCGTTCTTGGTTCTTTTGGTAAACCACCCAAACCTGATTGTGCCATTCGTCTCGAGATGAAATTCACGAAATGTGAGGATAGTCCACTGTACAGTTACGGAATTTCTTCCAATCCGAACCGTTTCAAAGTGCGGGATTCTTATTTTCCGGTGCGTCATGGAGGATCGGTGACGTTATATCAGGACGCACACGTCCCAGAGTCGATGGTGCCGAAAATTGAGTTGGAGAATGGCATTTTCTTCCAGCAAGGAAGATGTTGGGAAGATATATGTCATGCAATTTTGGAAGCACACCATTTGGTTTACATTGTAGGCTGGTCGATCTACCATAAGGTGAAGCTGGTGAGGGAGCCGACGAAGACCTTGCCTAATGGTGGCGATTTAAGTTTGGGTGATTTGCTAAAGTACAAGTCAGGCGAAGGTGCGCGAGTTTTATTATTGGTTTGGGATGATAAGACTTCACACAACAAATTTTTCATTAAAACGGATGGCGTAATGCGTACTCACGATGAAGAAACCCGAAAATTTTTCAAACACTCTTCGGTTTTCTGTGTGCTGTCACCCCGATATGCCAGCAGTAAGCTTAGCTTTATCAAACAGCAGGTTGTTGGAACCCTCTTTACACATCATCAGAAGTGTGTGATTGTGGATACTCAAGCACAAGGCAATAACCGCAAGATAACTGCATTTATAGGCGGTCTAGACCTGTGTGATGGCCGGTATGATACACCTGAGCATCGACTTTTCCAAGATATTGACACTGTTTATAAGGATGATTATCACAACCCTACATTTCCTGTTGGAATGAAGGGACCAAGGCAACCATGGCATGATTTACATTGCAAAATTGAGGGGCCTGCCGCATATGATGTACTTACTAATTTTGAGCAACGCTGGAGAAAAGCCACCAAGTGGCGCGAGTTGGGTCAAAAATTTAAAAAAGTATCTCGTTGGCACGATGATTCTTTGTTAAAGCTAGAACGCATCTCTTGGATTCTTAGTCCTTCTGCATTTATTTCAAATGATGATCCAGAACTATGGGTTTCGAAGGAAGAAGATCCTGAAAACTGGCATGTTCAGATTTTTCGATCAATAGATTCAGGTTCATTGAAAGGATTTCCTAAGGACTTGTATGAAGCTGAGGCTCAGAACCTTGTTTGTGCAAAAAATTTGGTCATTGACAGAAGTATACAAACAGCATACATACAGGCTATCAGATCGGCCCAACATTTTATTTACATTGAGAATCAATATTTTGTTGGATCGTCTTTTGCATGGCCATCTTACAAAGAAGCAGGTGCTGACAATTTAATTCCTATGGAGTTGGCATTGAAGATTGTCAGCAAAATTAGAGCCAATGAGAGATTTTCTGTTTATGTTGTTATACCAATGTGGCCCGAGGGTATCCCTTCTTCTGCCGCAGTTCAAGAGATTCTTTTTTGGCAGGGGCAAACTATGCAAATGATGTATGAAATCATAGCACAAGAGTTGATGTCCCTGCGCATTCACGACAGACGCCCAAGAGATTACCTCAATTTCTACTGTCTGGGAAATCGGGTTAACTGGCCGGCTGAAGGTTTAAGTTCAAGTACTTCAACTCCAAAAAACTGTGATACGGTTTCAGCTTCACAAAAGTTCCAACGCTTTATGATTTACGTGCACGCCAAGGGTATGATTGTGGATGATGAGTATGCGTTACTCGGCTCTGCTAATATCAATCAACGATCGTTGGCCGGTTCAAGAGATACAGAGATAGCAATGGGAGCATATCAACCCCATCACACATGGGAAAAGAAAGGGGAACATCCCCACGGCCAGGTATACGGGTATAGAATGTCTCTGTGGGCAGAACATCTAGGGATGGTTGATGATTGCTTCAAGGAGCCTAAAAGTTTGGAATGCGTGAAGAAAGTGAACAAGATTGCGAGTGAAAACTGGAAGAAGTACACAGCTGACGAGTTCAGTCCATTACAGGGGCACCTTATGAAATATCCAATACATGTAGATGTGAATGGCAAGGTACGTCCCATACCTGGATATGAAAATTTTCCTGACGTGGGTGGCAAGATACTTGGCAGCCGGACTACCCTTCCTGATGTCCTCACCACGTAG 2538 0.4413 MTGDKSENVVYLHGDLDLKILEARCLPNMDLLSERVSQFFSLFNSCTTSVSGRPRRHRHRKIITSDPYVKVCLAKATVARTRVISNSQDPTWNEHFKIPLAHPVSQVEFYVKDNDIFGADLIGVATVSAERILSGELISDWFPVLGSFGKPPKPDCAIRLEMKFTKCEDSPLYSYGISSNPNRFKVRDSYFPVRHGGSVTLYQDAHVPESMVPKIELENGIFFQQGRCWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTKTLPNGGDLSLGDLLKYKSGEGARVLLLVWDDKTSHNKFFIKTDGVMRTHDEETRKFFKHSSVFCVLSPRYASSKLSFIKQQVVGTLFTHHQKCVIVDTQAQGNNRKITAFIGGLDLCDGRYDTPEHRLFQDIDTVYKDDYHNPTFPVGMKGPRQPWHDLHCKIEGPAAYDVLTNFEQRWRKATKWRELGQKFKKVSRWHDDSLLKLERISWILSPSAFISNDDPELWVSKEEDPENWHVQIFRSIDSGSLKGFPKDLYEAEAQNLVCAKNLVIDRSIQTAYIQAIRSAQHFIYIENQYFVGSSFAWPSYKEAGADNLIPMELALKIVSKIRANERFSVYVVIPMWPEGIPSSAAVQEILFWQGQTMQMMYEIIAQELMSLRIHDRRPRDYLNFYCLGNRVNWPAEGLSSSTSTPKNCDTVSASQKFQRFMIYVHAKGMIVDDEYALLGSANINQRSLAGSRDTEIAMGAYQPHHTWEKKGEHPHGQVYGYRMSLWAEHLGMVDDCFKEPKSLECVKKVNKIASENWKKYTADEFSPLQGHLMKYPIHVDVNGKVRPIPGYENFPDVGGKILGSRTTLPDVLTT 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1477 845 ProSiteProfiles C2 domain profile. 1 142 IPR000008 -
Alju08g1477 845 Pfam Phospholipase D C terminal 765 835 IPR024632 -
Alju08g1477 845 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 12 166 IPR035892 -
Alju08g1477 845 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 691 718 IPR001736 GO:0003824
Alju08g1477 845 FunFam Phospholipase D delta 219 463 - -
Alju08g1477 845 Pfam C2 domain 14 144 IPR000008 -
Alju08g1477 845 SUPERFAMILY Phospholipase D/nuclease 539 777 - -
Alju08g1477 845 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 347 382 IPR001736 GO:0003824
Alju08g1477 845 CDD C2_plant_PLD 9 165 - -
Alju08g1477 845 Pfam Phospholipase D Active site motif 692 718 IPR001736 GO:0003824
Alju08g1477 845 Pfam Phospholipase D Active site motif 348 382 IPR001736 GO:0003824
Alju08g1477 845 SMART C2_3c 15 141 IPR000008 -
Alju08g1477 845 PIRSF PLD_plant 1 845 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Alju08g1477 845 Gene3D Endonuclease Chain A 515 740 - -
Alju08g1477 845 SUPERFAMILY Phospholipase D/nuclease 188 451 - -
Alju08g1477 845 Gene3D C2 domain 9 165 IPR035892 -
Alju08g1477 845 PANTHER PHOSPHOLIPASE D 6 836 IPR015679 -
Alju08g1477 845 SMART pld_4 347 382 IPR001736 GO:0003824
Alju08g1477 845 SMART pld_4 691 718 IPR001736 GO:0003824
Alju08g1477 845 Gene3D Endonuclease Chain A 221 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1477 Alju-ChrAlju08 11492915 11498051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1477 1 844 Phospholipase D Gene Family (Wang group) AT2G42010 52.921 0.0 943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g1477 08 11492915 11498051 Alju08g1477 08 11492915 11498051 ECH