Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1455 ATGCTGGGAACCTATGAACGTGTCCTAACAATAAACAAAGGTTTAATATCCCACACTCTCCCCGTTTCACGCCCTAGTCATCCAACTTCTCTTGTTCCCAACTCGTTTCTCTCTCCTGTGGAAATCCTCCTCTCCGATTCACCATCCTGGTACGTAATTCACTTATATTTTCTTATCAACATGAAAGGCGACAAATCTAAGGCAGAATCTAAGAAAGCTGATGCCAAGCTTGCTGTGAATAGGAAGGGCGTCGCCGCCTCCAAGGCGGGCAGGAAACCAAGCAAGGGAAAGGCGGCGAAAGACCCTAACAAACCAAAGAGACCGGCCAGTGCCTTCTTTGTTTTCATGGAGGAATTTAGGAAGCAGTTTAACAAGGAAAATCCTGACAACAAGGCAGTGTCTGCTGTTGGCAAAGCTGCTGGAGCTAAATGGAAGTCCATGTCTGATGCTGATAAAGCACCCTATGTGGCTAAAGCGGAGAAACGTAAGGCTGAGTATGAGAAGAACATGAAGGCTTATAATAAGAAACAGGCGGAAGGTCCCAATGCCGCAGATGAAGAAGAATCTGATAAGTCAATGTCCGAGGTTAATGATGCGGAGGGAGGAGATGAAGATGGCAGTGATGAGGAGGAAGATGACGAGTAG 645 0.4667 MLGTYERVLTINKGLISHTLPVSRPSHPTSLVPNSFLSPVEILLSDSPSWYVIHLYFLINMKGDKSKAESKKADAKLAVNRKGVAASKAGRKPSKGKAAKDPNKPKRPASAFFVFMEEFRKQFNKENPDNKAVSAVGKAAGAKWKSMSDADKAPYVAKAEKRKAEYEKNMKAYNKKQAEGPNAADEEESDKSMSEVNDAEGGDEDGSDEEEDDE 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1455 214 MobiDBLite consensus disorder prediction 162 198 - -
Alju08g1455 214 MobiDBLite consensus disorder prediction 162 214 - -
Alju08g1455 214 MobiDBLite consensus disorder prediction 81 107 - -
Alju08g1455 214 SUPERFAMILY HMG-box 93 181 IPR036910 -
Alju08g1455 214 SMART hmgende2 104 175 IPR009071 -
Alju08g1455 214 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 105 174 IPR009071 -
Alju08g1455 214 CDD HMG-box_AtHMGB1-like 106 166 - -
Alju08g1455 214 Gene3D High mobility group box domain 88 196 IPR036910 -
Alju08g1455 214 Coils Coil 156 176 - -
Alju08g1455 214 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 61 212 IPR031061 -
Alju08g1455 214 MobiDBLite consensus disorder prediction 199 214 - -
Alju08g1455 214 Pfam HMG (high mobility group) box 105 174 IPR009071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1455 Alju-ChrAlju08 11313781 11316247 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Alju08g1455 HMG_box 1.4e-23 CL0114