Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1449 ATGAATTTGATCTGGGCTGTTTCTTGTTGCGTCCTCGTGCTTTTCACAGTACCTCCATATGTGACAGGTGGTAATTCGTCGAGACCGGCCGTCGTGCATATCGGCGCTCTCTTCAACTTTGGTTCTACCATTGGGAGAGTCGCTAAAATCGCGTTGGAGGAAGCGGTGAAGGATGTCAACGCCAATGCTAGCGTGCTCCGTGGAACTAAACTTGTTCTCACTCTGCAAAATTCCAATTGCAGTGGTTTCTTGGGCATGGTTCAAGCTTTGCGGTTCATGGAGACTGATGTGGTGGCAATCATAGGCCCACAATCTTCCGTTGTTGCTCACATAATATCTCATGTGGCAAATGAGCTTCAAGTCCCTCTGTTGTCATTTGCAGCGACGGACCCAACCCTAACCAACCTACAGTTCCCTTTTTTTCTGAGAACAACGATGAGTGATTTGTACCAAATGGCTGCAGTTGCTGAAATTGTTGACTATTATGCTTGGAAGGAGGTCATTGCTATTTTTATAGATGATGATTTTGGACGAAATGGCGTGTCGGCCTTGGATGATCACCTATCAGCTAGGCGCTGTAGAATCTCTTACAAGGCAGGAATTAGATCAGGAACTGAAGTTGACCGGGGTGAAATCACGGATTTGCTGGTGAAGGTGGCTCTACTGCAATCTCGAGTCATTGTTCTCCATGTAAATCCTGATTCAGGATTTATGGTTTTCAATGTTGCGCAGTATCTTGGGATGACGGGGAATGGCTACGTCTGGATAGCCACAGATTGGCTCTCCTCTGTTGTGGATTCTACTTCTCTCCCTTCAGATACGATGAGTGTTCTTCAGGGAGTTCTTGTTTTACGCCAACATACTCCTGATTCAGATAGAAAAAAAGCATTTCTGTCTAGGTGGAACAAGTTAACTGGAGGCTCTGTGGGGTTACATTCTTATGGCCTTCATGCATATGACACTGTTTGGCTGCTTGCACATGCTATTGATGCATTCTTCAGCCAGGGTGGGATTATATCATTTTCTAATGACTCTAGGATACATGATGCTGACAAAGGTAGTCTTAACCTTGAGGCAATGAGCATGTTTGACAATGGAACGCTTCTGTTGAACAACATATTGCAGAGCAACTTTGTTGGTTTAACAGGTCCCGTAAAATTTGAGCCAGACAGATCTCTTGTTCGTCCTGCATATGACATTGTCAATGTGGTGGGAACTGGGATTCGTCAGGTTGGTTACTGGTCCAACTATTCTGGTCTTTCCATTGTACCTCCTGAGACATTGTATGCTAAGCCTCCTAATCGCTCCATTGCAAACCAACATCTTCATTCTGTAATATGGCCTGGGGAAACACTATCAAAACCCCGTGGATGGGTTTTTCCAAATAATGGAAAAAAATTGAGAATTGGTGTGCCTATCCGAATTAGTTACCGTCAATTTGTATCACCCATTCAAGGAAATGATATGTTTAAAGGTTACTGCATTGATGTATTCACGGCGGCTGTAAACTTGTTACCGTATGCTGTTCCATATAGCTTTGTTCCATTTGGAGATGGCCGTCAGAACCCAAACTACGATGAACTTGTCAGGTTGATCACCACAGGGTACTTTGATGGTGCTGTGGGTGACATTGCCATTGTCACAAATCGGACAAAGGTTGTAGATTTTACCCAGCCATATGCTGAGTCTGGACTTGTTGTGGTTGCGCCTTTTAAGAAAACAAACTCTGGTGGATGGTCTTTTCTGCGGCCATTTACTCCTTTAATGTGGATTGTCACTGCTTGCTTCTTCTTTTTCATTGGGATAGTTGTATGGATTCTGGAGCACAGAATAAATGACGAGTTCAGGGGTCCACCTAGACAGCAAATTATAACCATTTTATGGTTTAGCTTGTCAACTCTATTCTTTGCCCACAGAGAGAATACTATGAGTACTCTTGGTCGCATGGTGGTACTCATGTGGCTGTTTGTGGTTTTGATAATCAATTCCAGCTACACAGCAAGTTTGACATCAATCCTCACAGTGCAGCAACTCTCTTCTAATATCAATGGAATAGACAGCTTAAAAGTTGGTAATGAACCTATAGGGTATCAAGTGGGTTCATTCGCAGAACATTATTTGGCTGACGAAATTGGAATATCCAAATCCAGGCTTGTTGCCCTTGGATCTCCTGAAGAATATGCCAAGGCTCTCCAGCTTGGTCCTGACAATGGAGGTGTCGCTGCTATTGTTGACGAACGACCCTATGTTGAAATTTTCTTGTCAACCCATTGCAGCTTCAGGATAGTAGGTCAGGAGTTCACCAGAAGCGGCTGGGGATTTGCATTCCCACGGGACTCTCCTCTGGCCATTGACTTGTCCACTGCAATCCTACAGCTTTCTGAAAATGGTGAACTGCAACGGATTTATGATAAGTGGCTCGTAGGAAGATCCTGTAGTGCGGATGATACTGAAATAGATTCAGATCGGCTTCAGTTTAAAAGCTTCTGGGGTCTCTTTCTTATATGTGGGATTGTTTGCATTGTTGCTCTTTCTATCTATTTTTTGCAGATTATGATGCAGTTATGCCATTCTGATCCTCCTCAACCAGCTTCTTCCAATGGAAGCCCATCTGGACGTCTTCGAAGATTTATTTCGCTGATCGACGAGAAGAAAGAACGGTCCTATAACAGCAGTAGAAAGAGGGTTGAAGCCCAAAGATCACCAGAAGAAGATGGATTGGGGAGGCAGCTAAAGAGGTTACAAACAGAAACAAGTCAAACAACTTCTCAAGTCAGTTTTCCATTACAAAATGATCAGGTATAA 2805 0.4371 MNLIWAVSCCVLVLFTVPPYVTGGNSSRPAVVHIGALFNFGSTIGRVAKIALEEAVKDVNANASVLRGTKLVLTLQNSNCSGFLGMVQALRFMETDVVAIIGPQSSVVAHIISHVANELQVPLLSFAATDPTLTNLQFPFFLRTTMSDLYQMAAVAEIVDYYAWKEVIAIFIDDDFGRNGVSALDDHLSARRCRISYKAGIRSGTEVDRGEITDLLVKVALLQSRVIVLHVNPDSGFMVFNVAQYLGMTGNGYVWIATDWLSSVVDSTSLPSDTMSVLQGVLVLRQHTPDSDRKKAFLSRWNKLTGGSVGLHSYGLHAYDTVWLLAHAIDAFFSQGGIISFSNDSRIHDADKGSLNLEAMSMFDNGTLLLNNILQSNFVGLTGPVKFEPDRSLVRPAYDIVNVVGTGIRQVGYWSNYSGLSIVPPETLYAKPPNRSIANQHLHSVIWPGETLSKPRGWVFPNNGKKLRIGVPIRISYRQFVSPIQGNDMFKGYCIDVFTAAVNLLPYAVPYSFVPFGDGRQNPNYDELVRLITTGYFDGAVGDIAIVTNRTKVVDFTQPYAESGLVVVAPFKKTNSGGWSFLRPFTPLMWIVTACFFFFIGIVVWILEHRINDEFRGPPRQQIITILWFSLSTLFFAHRENTMSTLGRMVVLMWLFVVLIINSSYTASLTSILTVQQLSSNINGIDSLKVGNEPIGYQVGSFAEHYLADEIGISKSRLVALGSPEEYAKALQLGPDNGGVAAIVDERPYVEIFLSTHCSFRIVGQEFTRSGWGFAFPRDSPLAIDLSTAILQLSENGELQRIYDKWLVGRSCSADDTEIDSDRLQFKSFWGLFLICGIVCIVALSIYFLQIMMQLCHSDPPQPASSNGSPSGRLRRFISLIDEKKERSYNSSRKRVEAQRSPEEDGLGRQLKRLQTETSQTTSQVSFPLQNDQV 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1449 934 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 883 IPR015683 -
Alju08g1449 934 FunFam Glutamate receptor 462 577 - -
Alju08g1449 934 Pfam Ligand-gated ion channel 808 839 IPR001320 GO:0015276|GO:0016020
Alju08g1449 934 Gene3D - 462 576 - -
Alju08g1449 934 SUPERFAMILY Periplasmic binding protein-like II 443 807 - -
Alju08g1449 934 PIRSF IGluLR_plant 1 932 IPR017103 -
Alju08g1449 934 Gene3D - 50 395 - -
Alju08g1449 934 Pfam Receptor family ligand binding region 50 405 IPR001828 -
Alju08g1449 934 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 318 330 - -
Alju08g1449 934 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 45 61 - -
Alju08g1449 934 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 105 133 - -
Alju08g1449 934 CDD PBP1_GABAb_receptor_plant 33 424 IPR044440 -
Alju08g1449 934 Gene3D - 147 420 - -
Alju08g1449 934 FunFam Glutamate receptor 704 811 - -
Alju08g1449 934 MobiDBLite consensus disorder prediction 885 911 - -
Alju08g1449 934 Pfam Bacterial extracellular solute-binding proteins, family 3 487 807 IPR001638 -
Alju08g1449 934 FunFam Glutamate receptor 578 708 - -
Alju08g1449 934 SMART GluR_14 468 809 IPR001320 GO:0015276|GO:0016020
Alju08g1449 934 Gene3D - 757 814 - -
Alju08g1449 934 MobiDBLite consensus disorder prediction 885 934 - -
Alju08g1449 934 PRINTS Metabotropic glutamate GPCR signature 132 151 IPR000337 GO:0004930|GO:0007186|GO:0016020
Alju08g1449 934 PRINTS Metabotropic glutamate GPCR signature 100 126 IPR000337 GO:0004930|GO:0007186|GO:0016020
Alju08g1449 934 PRINTS Metabotropic glutamate GPCR signature 167 184 IPR000337 GO:0004930|GO:0007186|GO:0016020
Alju08g1449 934 PRINTS Metabotropic glutamate GPCR signature 151 167 IPR000337 GO:0004930|GO:0007186|GO:0016020
Alju08g1449 934 MobiDBLite consensus disorder prediction 912 934 - -
Alju08g1449 934 CDD GluR_Plant 465 807 - -
Alju08g1449 934 FunFam Glutamate receptor 147 302 - -
Alju08g1449 934 Gene3D - 577 709 - -
Alju08g1449 934 SUPERFAMILY Periplasmic binding protein-like I 26 458 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1449 Alju-ChrAlju08 11263954 11267870 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1449 25 898 Ion Channels AT1G42540 65.463 0.0 1236