Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1426 ATGACTTGTGGTGAAATTTTCCGATATACTTCACATCATAATTCAAACGAATTACGCGGTTTTCATAGTCAACGCCAGCGGCTTTCGGATTGTGATTTCGGGTGTGGTGGGGGAATGTCAATCACCCACCTTGAGATGGTGAGGGAGACCGAATACTATGACGTGCTGGGAGTCAGCCCCACGGCAACTGAGGCCGAGATTAAAAAAGCTTATTACATAAAGGCACGACAGGTACATCCAGATAAAAACCCAAATGACCCCAACGCAGCACAAAAATTTCAGGTTTTGGGTGAGGCTTACCAAGTTTTAAGTGACCCAAGTCAAAGACAAGCTTATGATACTCATGGAAAATCTGGAATCTCAACTGATGCCATTATTGATCCAGCAGCAATCTTCGCCATGCTTTTTGGCAGTGAGCTTTTTGAGGAGTACATTGGCCAATTAGCCATGGCATCAATGGCATCAATGGATATCTTTATTGAAGGGGAACAATTTGATGCTAAAAAGTTGCAAGAGAAAATGAGGGTTGTTCAGAAAGAGAGAGAAGAAAAGCTTGCAGAGATACTCAAAAATAGACTAAACCAATATGTCCAAGGAAACAAATCGGAATTTATCAATCATGCAAAAGATGAAGTGTCACGACTATCCAATGCAGCTTATGGGGTTGATATGTTGAATACCATTGGCTACATATATGCAAGGCAGGCAGCTAAAGAGCTAGGGAAGAAAGCAATTTATTTAGGTGTGCCTTTCATTGCTGAGTGGTTTAGAAACAAAGGACACTTCATCAAGTCCCAAGTTACAGCAGCTACAGGGGCAATTGCTCTGATCCAGCTACAGGAGGATATGAAGAAGCAGCTAAGTGAAGAAAGGAACTACACTGAAGTAGAGCTAGAAGAATACATGCAATCCCATAAGAAATTAATGGTTGACTCATTGTGGAAGCTTAATGTTGCCGACATTGAGGCTACTCTATCCCGTGTCTGTCAAATGGTTCTCCAAGACAACAGTGTCAAAAAAGAAGAACTCCGTGCACGAGCTAAGGGGTTGAAAACTCTTGGTAAAATCTTTCAGGGAGTTAAGTCAACCGATGGAAATGAGGGTGAAAATGCACCTAATGAACCAGGAGTACATAAATTGAATGGTAGGGAATCAAGCGATGACGCTTGTTCTCCCGGTACATCTCAAAAAAGTTCAAACCCTGATTTTTCATCACAAACTGTCACTGTGCCTCAGAGTCCCTATGTGGAGGCCCCTCAATTTGCAGGCTCTTTCATGGACCATAACTTCCCTAGGCCGATAGCACCCCCTGGTGCCCAGAGACCAATCAACAGTGATTGA 1341 0.4288 MTCGEIFRYTSHHNSNELRGFHSQRQRLSDCDFGCGGGMSITHLEMVRETEYYDVLGVSPTATEAEIKKAYYIKARQVHPDKNPNDPNAAQKFQVLGEAYQVLSDPSQRQAYDTHGKSGISTDAIIDPAAIFAMLFGSELFEEYIGQLAMASMASMDIFIEGEQFDAKKLQEKMRVVQKEREEKLAEILKNRLNQYVQGNKSEFINHAKDEVSRLSNAAYGVDMLNTIGYIYARQAAKELGKKAIYLGVPFIAEWFRNKGHFIKSQVTAATGAIALIQLQEDMKKQLSEERNYTEVELEEYMQSHKKLMVDSLWKLNVADIEATLSRVCQMVLQDNSVKKEELRARAKGLKTLGKIFQGVKSTDGNEGENAPNEPGVHKLNGRESSDDACSPGTSQKSSNPDFSSQTVTVPQSPYVEAPQFAGSFMDHNFPRPIAPPGAQRPINSD 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1426 446 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 32 387 - -
Alju08g1426 446 SUPERFAMILY Chaperone J-domain 46 146 IPR036869 -
Alju08g1426 446 MobiDBLite consensus disorder prediction 360 446 - -
Alju08g1426 446 Gene3D DnaJ domain 41 128 IPR036869 -
Alju08g1426 446 Coils Coil 284 304 - -
Alju08g1426 446 ProSiteProfiles dnaJ domain profile. 51 116 IPR001623 -
Alju08g1426 446 Pfam DnaJ domain 51 113 IPR001623 -
Alju08g1426 446 SMART dnaj_3 50 108 IPR001623 -
Alju08g1426 446 FunFam Chaperone protein dnaJ 10 46 128 - -
Alju08g1426 446 PRINTS DnaJ domain signature 88 108 IPR001623 -
Alju08g1426 446 PRINTS DnaJ domain signature 53 71 IPR001623 -
Alju08g1426 446 PRINTS DnaJ domain signature 71 86 IPR001623 -
Alju08g1426 446 PRINTS DnaJ domain signature 108 127 IPR001623 -
Alju08g1426 446 Coils Coil 160 187 - -
Alju08g1426 446 MobiDBLite consensus disorder prediction 387 414 - -
Alju08g1426 446 Pfam X-domain of DnaJ-containing 178 370 IPR026894 -
Alju08g1426 446 CDD DnaJ 51 105 IPR001623 -
Alju08g1426 446 ProSitePatterns Nt-dnaJ domain signature. 93 112 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1426 Alju-ChrAlju08 11060163 11069700 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1426 52 115 C2H2 Transcription Factor Family AT1G74250 42.029 9.29e-09 55.8