Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1414 ATGTGTTCGGTAGTCTGGGATAAAGTTCGGAAGGAAGGAGGTGATAAGAAACGGGTCTCTGATGACAGTCGGGTCGCGAGTATAAAAGGAGCCTCTCTTGCCAAATCTGTGCAGTGTAGACGCCAAAATCCAAATCTTACAGTCAATAACAGTCCAATCAAATATTATTTGATCCTTCAATCAGAACCTCAATTTTCTGATCACGACGTCGCTTTGTTATCTCGTGATCCAGATCTTCACACACCACTCTTCTCCCTCCCAAATGCTCGTGACCCTGCAAAGAGTTTAGAAATGGCTGGGGATAGGGTTACAGAGGAGGCGGTGAGGGACGAAAGAGAGGAGAAAAGAAAGCGAATGTTCTCGCCTTCGAGATCGTCGTCGTCTTCTTCTTCCGATGACCGGGAATACGAAGTTCAGGACCTGAGAGACAGGTTGAAATCGTCGAGAGGAAGCCGATTCCAATTGATCGAGGATGAGTTGAAGGAACTCAACCGGAGGAAACTCAGTAGCTACGTCCTTGACGGCATCAGAGGCTTCTCCAAAGATTTCATCATTCATCCGGAGAAGAACAGGTGGTATCGAGCATGGACAAAATTCATATTGCTGTGGGCAATATACTCATCCTTCTTCACCCCAATGGAGTTTGGATTTTTTCGTGGGCTAGACAAGGATCTCTTTATATTGGATATAATTGGTCAAGTTGCGTTTCTTGTAGACATTGTTGTGCAGTTCTTCCTTGCTTATAGGGATAGTCAGACATATCGTATGATTTACAAGCCATCCTCTATAGCTCTACGATATCTAAAATCTAGCTTTATCTTTGATCTTCTGGGATGTATGCCTTGGGACATCATCTATAAGGCTAGTGGAAGAAGAGAGGGTGTAAGGTATCTTCTCTGGATAAGATTATATCGAGTGCGAAAAGTGAATGAATTTTTTCAGAGGATGGAAAAGGACATACGTATCAATTACATGTTTACTAGGATTGTGAAACTTCTAGTAGTTGAACTCTACTGCACGCATACAGCTGCCTGCGTCTTCTACTACTTGGCTACTACGCTACCATCATCTCAAGAGGGTTACACATGGATAGGAAGTTTGAAGCTAGGTGACTATAGTTATATGAATTTCAGAGACATTGATCTTTGGAAGCGTTACACAACATCTTTATATTTCGCTATTGTTACAATGGCCACTGTTGGCTATGGAGACATACATGCGGTAAATATGAGGGAGATGATATTCGTAATGATATATGCTTCATTTGATATGGTTCTTGGTGCTTATTTAATTGGTAACATGACAGCTTTAATAGTTAAAGGATCAAAAACAGAAAAGTTTAGGGATAGAATGACGGATCTTTTGAAATATATGAATAGAAATAAACTCGGAAGGGATATTCGTGAACAATTAAAAAGCCATATGCGCTTACAATATGAAAGTAGCTACACTGAGCCAGCTGCCATTCAAGATCTCCCCATCTCAGTTCGATCCAAGATATCTCAAGAGTTATATTTGCCATACATCGAGAAGGTCCCTCTCTTTAAGGGTTGCTCTTTAGAATTTATCAATCAGATCGTTATGAGGCTCCATGAGGAATTCTTTCTCCCGGGAGAAGTAATATTTGAACAAGGAAATGTTGTAGATCAACTATACTTTATTTGTCATGGTGTGCTGGAGGAAGTAGGCCCTAGTGAAAATGGACCTGAAGAGACTGTTTCACTTTTAGAGCAGAACAATTCATTTGGGCATATATCTATTCTATGTAACATTCCTCAACCATATACTGTTAGAGTGTGTGAACTGTGTAGGCTTCTGCGGCTTGATAAACAATCATTTACGGATATCCTTGATATATACTTTTATGATGGGAGGAAAGTACTGAACAACCTTCTAGAGGGAAAAGACTCTAGTCGAGGTAAGCAATTGGAGTCAGAAATCACATTCCATATTGGAAAGCAAGAAGCTGAACTTGCTTTAAAGGTCAATAATGCAGCTTTCAATGGGGATCTAAATCATCTCAAAGGATTTATTCGAGCTGGAGCTGATCCAAACAAGACAGATTATGATGGACGGTCCCCATTACATCTTGCAGCATCTAGAGGATATGAAGAAATTACCCTTTTCCTTATCCAAGAAGGTGTAGAAATTGATAAGAGAGATAACTTTGGGAACACACCCTTATTTGAAGCTGTAAAGAATGGACATGATCAAGTTGCTTCTTTACTTGTTGGACAAGGGGCTTCTATGGACATAGAGGATGCCGGTAGTATTCTATGTAATGCTATTGTAAGGGGAGATTCAGAATATCTTAAAAGGCTATTAGCTAATGGCATAGATCCTAACACGAAAGACTATGATTACCGAAGCCCTCTTCATGTGGCTACAGCTGAGGGTTTATTCTTAATGGCAAAGTTTTTGATAGAAGCTGGAGCTAGCGTTTTTATCCAAGATAGATGGGGAAATACCCCACTTGATGAAGCCAAGATGTGTGGAAATAACAATTTAATTAAGCTATTGGAAGATGCAAAGTCTGCTCAGTTGTCAAAATTCCCTCATCTTTCCTTAGAACTTACAGATAAATTTCATCCTAAGAAATGTACTGTCTTTCCTTTCCACCCATGGGATCCAAAAGAACATAGAAGACATGGGATTGTACTATGGGTTCCACACACCATTGAAGATCTCATCAAAACAGCAGCAAAACAGCTAGGTGTTTCTAGTGATTGCTCTATTATTCTATCAGAGGATACTGGTAAAATCAATGATGCCAACTTGATTATAGATGGTCAAAAGTTGTATCTAGTCCATGAAACACATTAA 2823 0.3989 MCSVVWDKVRKEGGDKKRVSDDSRVASIKGASLAKSVQCRRQNPNLTVNNSPIKYYLILQSEPQFSDHDVALLSRDPDLHTPLFSLPNARDPAKSLEMAGDRVTEEAVRDEREEKRKRMFSPSRSSSSSSSDDREYEVQDLRDRLKSSRGSRFQLIEDELKELNRRKLSSYVLDGIRGFSKDFIIHPEKNRWYRAWTKFILLWAIYSSFFTPMEFGFFRGLDKDLFILDIIGQVAFLVDIVVQFFLAYRDSQTYRMIYKPSSIALRYLKSSFIFDLLGCMPWDIIYKASGRREGVRYLLWIRLYRVRKVNEFFQRMEKDIRINYMFTRIVKLLVVELYCTHTAACVFYYLATTLPSSQEGYTWIGSLKLGDYSYMNFRDIDLWKRYTTSLYFAIVTMATVGYGDIHAVNMREMIFVMIYASFDMVLGAYLIGNMTALIVKGSKTEKFRDRMTDLLKYMNRNKLGRDIREQLKSHMRLQYESSYTEPAAIQDLPISVRSKISQELYLPYIEKVPLFKGCSLEFINQIVMRLHEEFFLPGEVIFEQGNVVDQLYFICHGVLEEVGPSENGPEETVSLLEQNNSFGHISILCNIPQPYTVRVCELCRLLRLDKQSFTDILDIYFYDGRKVLNNLLEGKDSSRGKQLESEITFHIGKQEAELALKVNNAAFNGDLNHLKGFIRAGADPNKTDYDGRSPLHLAASRGYEEITLFLIQEGVEIDKRDNFGNTPLFEAVKNGHDQVASLLVGQGASMDIEDAGSILCNAIVRGDSEYLKRLLANGIDPNTKDYDYRSPLHVATAEGLFLMAKFLIEAGASVFIQDRWGNTPLDEAKMCGNNNLIKLLEDAKSAQLSKFPHLSLELTDKFHPKKCTVFPFHPWDPKEHRRHGIVLWVPHTIEDLIKTAAKQLGVSSDCSIILSEDTGKINDANLIIDGQKLYLVHETH 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1414 940 PRINTS Ankyrin repeat signature 803 817 IPR002110 GO:0005515
Alju08g1414 940 PRINTS Ankyrin repeat signature 691 706 IPR002110 GO:0005515
Alju08g1414 940 ProSiteProfiles Ankyrin repeat profile. 787 819 IPR002110 GO:0005515
Alju08g1414 940 MobiDBLite consensus disorder prediction 85 136 - -
Alju08g1414 940 ProSiteProfiles Ankyrin repeat region circular profile. 690 722 - -
Alju08g1414 940 SUPERFAMILY cAMP-binding domain-like 442 631 IPR018490 -
Alju08g1414 940 Gene3D - 196 440 - -
Alju08g1414 940 SMART ANK_2a 723 752 IPR002110 GO:0005515
Alju08g1414 940 SMART ANK_2a 787 816 IPR002110 GO:0005515
Alju08g1414 940 SMART ANK_2a 690 719 IPR002110 GO:0005515
Alju08g1414 940 SMART ANK_2a 754 783 IPR002110 GO:0005515
Alju08g1414 940 SMART ANK_2a 820 850 IPR002110 GO:0005515
Alju08g1414 940 Gene3D Jelly Rolls 484 647 IPR014710 -
Alju08g1414 940 MobiDBLite consensus disorder prediction 95 121 - -
Alju08g1414 940 SUPERFAMILY Voltage-gated potassium channels 189 439 - -
Alju08g1414 940 ProSiteProfiles Ankyrin repeat profile. 723 755 IPR002110 GO:0005515
Alju08g1414 940 PRINTS EAG/ELK/ERG potassium channel family signature 386 403 IPR003938 GO:0005249|GO:0006813|GO:0016020
Alju08g1414 940 PRINTS EAG/ELK/ERG potassium channel family signature 430 439 IPR003938 GO:0005249|GO:0006813|GO:0016020
Alju08g1414 940 PRINTS EAG/ELK/ERG potassium channel family signature 338 348 IPR003938 GO:0005249|GO:0006813|GO:0016020
Alju08g1414 940 PRINTS EAG/ELK/ERG potassium channel family signature 229 239 IPR003938 GO:0005249|GO:0006813|GO:0016020
Alju08g1414 940 Gene3D - 756 850 IPR036770 -
Alju08g1414 940 ProSiteProfiles Ankyrin repeat region circular profile. 787 819 - -
Alju08g1414 940 ProSiteProfiles Ankyrin repeat region circular profile. 723 754 - -
Alju08g1414 940 ProSiteProfiles KHA domain profile. 866 940 IPR021789 -
Alju08g1414 940 SUPERFAMILY Ankyrin repeat 663 842 IPR036770 -
Alju08g1414 940 Pfam Ion transport protein 194 439 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Alju08g1414 940 Pfam Cyclic nucleotide-binding domain 534 618 IPR000595 -
Alju08g1414 940 PANTHER POTASSIUM CHANNEL AKT1 165 937 IPR045319 GO:0005249|GO:0006813
Alju08g1414 940 FunFam Potassium channel SKOR 194 439 - -
Alju08g1414 940 CDD CAP_ED 514 628 IPR000595 -
Alju08g1414 940 SMART cnmp_10 514 632 IPR000595 -
Alju08g1414 940 Gene3D - 648 755 IPR036770 -
Alju08g1414 940 ProSiteProfiles Ankyrin repeat profile. 690 722 IPR002110 GO:0005515
Alju08g1414 940 FunFam Potassium channel KAT2 502 639 - -
Alju08g1414 940 Pfam KHA, dimerisation domain of potassium ion channel 865 935 IPR021789 -
Alju08g1414 940 ProSiteProfiles cAMP/cGMP binding motif profile. 514 634 IPR000595 -
Alju08g1414 940 Pfam Ankyrin repeats (3 copies) 762 841 IPR002110 GO:0005515
Alju08g1414 940 Pfam Ankyrin repeats (3 copies) 664 754 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1414 Alju-ChrAlju08 10961424 10970262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1414 761 840 Ion Channels AT5G37500 35.294 6.97e-09 57.8