Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1394 ATGATGAGCACGCAAACAAGGTTTCCCTCGGCTTCTCTTCTTCTCCTTCCTCTTAACTCTATCACTATTTCTCATTCCTTGGTTCTGGAGATTTCAGACCTCGTGTTGCTTTCTCTATTGATTCCGATTATTTTCCCGGAAAAACTTTTCCGGCTTCTTCTCCGGTGTGCGTTCGAGGGTAGAAGAAGAACACTGAGTTGTGTTGTGGTTCTGAATCCGCTGAAATTTGCTGTTATGGCTATTCAGGATCGTAATGAAGTTTCTAGATACAATGGTCTTCCGCTAGAAAATGGGGGATCTCTGAGTTCTGGACTAGGTTCTGCTTCACGTGTTGAACAAAAGGATTTGATTTCTCGTGGAAAAGAACGTGCTCCAAAGGTAAGGAAACCATACACCATCACGAAACAGAGGGAGCGATGGACTGACGAAGAGCATGAGAAATTCATTGAAGCTCTGAAGCTCTATGGAAGGGCATGGCGAAAGATTGAAGAACATGTTGGCACAAAGACAGCAGTTCAGATTCGAAGCCATGCTCAGAAGTATTTCACAAAGGTTGTTCGCGAGTCTAGTGGGGGAAGCATAATAAGCACAGTGGAGTCCATTGAAATCCCACCTCCACGACCAAAGAAAAGGCCTTCTCATCCTTACCCTCGCAAGCGGGTAGTGTTCCCTGATACAGCAATCTCCATTGAAGGCAAGGCACTGAGGTCTAATTCTCTCAAGTCATTAGAATCTGATCAAGAAAACCAGTCTCCAAAATCAGTGTTATCTACGATTGGCTTAGACACTCCTGGATACTCTGAACCAAATGGAAGTTCATCTGAGGAAGATGGTTCTGCCCCAAATGCCGATTCATCGCTTGATCCACAAACTCCTCTGAAATTTGAGCTTTTCCCTAAGGAAAGTGTTTATGCCAAAGAAGACGCAGCAGAGGAACCTTGTGGTCGGGTTGTTAAGCTTTTTGGGGCTAATCTTCTGGCTATAGATTGTTGTCCAACAAAGAAGAATTCTGATAAAACAGAAGCTCCTGCTGGTTTTGCTCCTAGGAGAACTCTAGTTGAAGATAAAGTTGAAAAGGAATTATCTTGGGGTGGTTCAAACATGACTAGCTCTGTAAATGATGGTGACATTAATGATGAAAACCCAGATGATGTTGAAGCCAGAAGTCACATGCATTTCTCTGGAAAGGGAGAAAAATTGAGTCTTTTTAGCGCCTTGATAACACCCAGAGGACCATCAACCATATCTGAATTATTGGTGAGGTCTAAAGGGTTTGTGCCATATAAAAAATTCTTAGCAGAGAGAGAAAATCAGCCCTTTCCTATAACAGCACAGGAGAGGGATGGCCAAAGCATTCGCCTTTCATTATAG 1371 0.4325 MMSTQTRFPSASLLLLPLNSITISHSLVLEISDLVLLSLLIPIIFPEKLFRLLLRCAFEGRRRTLSCVVVLNPLKFAVMAIQDRNEVSRYNGLPLENGGSLSSGLGSASRVEQKDLISRGKERAPKVRKPYTITKQRERWTDEEHEKFIEALKLYGRAWRKIEEHVGTKTAVQIRSHAQKYFTKVVRESSGGSIISTVESIEIPPPRPKKRPSHPYPRKRVVFPDTAISIEGKALRSNSLKSLESDQENQSPKSVLSTIGLDTPGYSEPNGSSSEEDGSAPNADSSLDPQTPLKFELFPKESVYAKEDAAEEPCGRVVKLFGANLLAIDCCPTKKNSDKTEAPAGFAPRRTLVEDKVEKELSWGGSNMTSSVNDGDINDENPDDVEARSHMHFSGKGEKLSLFSALITPRGPSTISELLVRSKGFVPYKKFLAERENQPFPITAQERDGQSIRLSL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1394 456 SMART sant 136 184 IPR001005 -
Alju08g1394 456 Gene3D - 139 186 - -
Alju08g1394 456 MobiDBLite consensus disorder prediction 363 384 - -
Alju08g1394 456 CDD SANT 139 182 IPR001005 -
Alju08g1394 456 SUPERFAMILY Homeodomain-like 131 185 IPR009057 -
Alju08g1394 456 Pfam Myb-like DNA-binding domain 137 182 IPR001005 -
Alju08g1394 456 MobiDBLite consensus disorder prediction 240 291 - -
Alju08g1394 456 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 132 186 IPR017930 -
Alju08g1394 456 PANTHER SWI/SNF COMPLEX-RELATED 124 367 - -
Alju08g1394 456 MobiDBLite consensus disorder prediction 197 222 - -
Alju08g1394 456 ProSiteProfiles SANT domain profile. 135 186 IPR017884 -
Alju08g1394 456 NCBIfam myb-like DNA-binding domain, SHAQKYF class 135 184 IPR006447 GO:0003677
Alju08g1394 456 FunFam protein REVEILLE 6 isoform X1 139 187 - -
Alju08g1394 456 ProSiteProfiles Myb-like domain profile. 132 182 IPR001005 -
Alju08g1394 456 MobiDBLite consensus disorder prediction 240 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1394 Alju-ChrAlju08 10780296 10782918 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju08g1394 Myb_DNA-binding 8.4e-15 CL0123