Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1390 ATGGCACCTGTTTCACTGCCTCCTGGTTTTAGGTTCCACCCAACGGATGAGGAGCTGGTTGCTTATTATCTCAAAAGGAAGATCAATGGCCACAGGATTGAGTTAGAGATCATCCCCGAAGTTGATCTTTACAAGTGCGAACCCTGGGACTTGCCTGGAAAATCGTTGTTACCGGGAAAAGATTTGGAGTGGTATTTTTTCAGTCCTCGAGATAGGAAGTACCCAAATGGGTCAAGAACAAACAGAGCGACAAAATCGGGATATTGGAAAGCCACAGGAAAAGACAGGAAAGTGAATTCTCAATCTCGTTCAGTGGGCATGAAGAAAACCCTAGTTTACTATCGAGGTCGAGCCCCTCATGGATGTCGTACCAACTGGGTCATGCATGAGTATCGTCTTGACGAAAAAGAATGTGAAGTTGCTTCTGGCATTCAGGATGCTTATGCTCTCTGTCGTGTGTTCAAGAAGACTGCAGTTATAACCACGAAAATAGGAGAGCATTACGTGAATAATGGATCAGATCAGATTATGAATACAAGTGATCAGTCATCTAGCATAGAACTATACTCCGAAGGAAGATCAGGAGAAGATTTAGAGAGCTCAGATTATTTGATGCCTCTGGATCATCATAATAGCTCATCACCCCATATTGGAAATCCCTCTTCAGGACCAAGAGATCATGGGAAATGGTCACAGACACAGTTCTTTTCTGAAGAAGATCCTTTCTCTTTCCCAAATTCTTCTTCGTTATTTTCCAACTATGGTTCCATACCATACCCTCCATCCAAGGTGGATATTGCACTGGAATGTGCCAGGATGCAGCATAGGTTTTCTCCAATGGAGGACTTGCCTTCTGAAATGAAGATGCAAGCTCAATATGGTGGGACCAGGAATGAAACTGATGAGTTATTACATGAGATTCTTTCAGTTGCTCATGCTTCTCAGGAACTCATAAACCAGTCTTCTGATTACTATTCTTCTCATTCATGGGGTAATACTAGCACAGCAGCAAACCAGCATTATTATGGTCCTTCTGAACAGGAAGATGGTTTCACTTTCATGGTTGGCAGAGATAGTACTGCTAATGACTATAATTATTATAGCAATGCTGGCTGGGAAGATCCAGTGAACACAAGGTCCGTAGAGATTGGAGATCTGGATGATGATTTCAAAGCTGAGAGGATCGTTGAGAATTTAAGATGGGTTGGCATGTCAAGCAAGGATCAGGAAATTAAGAGCTATATGGAAGATCAGAAAGTTGTTCCAATTGAGGATATTTCAAGCTTCCGAGCAAATAGGGAGGGGAATGAATTGCTGCAAGAATGCGATAATCAGCAAGAAAATAGCAGCAAGCAGGAACTGAATGACACAGACATAAACGACGACATGTCATTAGGGTTCATCAACGAGGAAGACGCTAATAATGAGAACTTGATAGATGAAGAAGGCGATGATGATTATTCGAGTTCTCCAAGCTTCGACGTGGTAGAAGAAGTCAAAGTTAGCCACGGAATGTTTGTGTCCACGAGACAAGTAGCCGACACATTCTTTCACCAAATAGTTCCTTCACAAACTCTCAAGGTTCACCTCAATCCAGTGATAATGGCACACAATAATTATCACTCAGTGGGGAACATAGAGACAGTTTCTTTCTTTAGAAACTTGAAGGCCTGTGTGGTGAAGACAATAACAAGTCCCATTGTGTTCATATTTTCACTTCTGCTGATGTCTTGTATTTATTATTCATCAGATTCTGATCATCAGGATGTGAAGGATAGAAGTTGGAGCACTGGTAATTGCAGTAATAGCATGAAGAGAGTGATGAGAGAATATGAAGAAGATGATGAGAAGCAAGAAGTTTGGTTTGTGGGCATCAAAAGTGGAAAAGGGTTCAGTGTGGTGTTGAAGAAGATAGGAATTTTTCTCACAATTTCTTTTGCTCTTTGTACCATGTGGGCTAACCACATCATTGTTCATTAA 1980 0.4146 MAPVSLPPGFRFHPTDEELVAYYLKRKINGHRIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQSRSVGMKKTLVYYRGRAPHGCRTNWVMHEYRLDEKECEVASGIQDAYALCRVFKKTAVITTKIGEHYVNNGSDQIMNTSDQSSSIELYSEGRSGEDLESSDYLMPLDHHNSSSPHIGNPSSGPRDHGKWSQTQFFSEEDPFSFPNSSSLFSNYGSIPYPPSKVDIALECARMQHRFSPMEDLPSEMKMQAQYGGTRNETDELLHEILSVAHASQELINQSSDYYSSHSWGNTSTAANQHYYGPSEQEDGFTFMVGRDSTANDYNYYSNAGWEDPVNTRSVEIGDLDDDFKAERIVENLRWVGMSSKDQEIKSYMEDQKVVPIEDISSFRANREGNELLQECDNQQENSSKQELNDTDINDDMSLGFINEEDANNENLIDEEGDDDYSSSPSFDVVEEVKVSHGMFVSTRQVADTFFHQIVPSQTLKVHLNPVIMAHNNYHSVGNIETVSFFRNLKACVVKTITSPIVFIFSLLLMSCIYYSSDSDHQDVKDRSWSTGNCSNSMKRVMREYEEDDEKQEVWFVGIKSGKGFSVVLKKIGIFLTISFALCTMWANHIIVH 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1390 659 MobiDBLite consensus disorder prediction 175 231 - -
Alju08g1390 659 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 273 - -
Alju08g1390 659 MobiDBLite consensus disorder prediction 206 231 - -
Alju08g1390 659 FunFam Nac domain-containing protein 86 15 159 - -
Alju08g1390 659 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Alju08g1390 659 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Alju08g1390 659 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Alju08g1390 659 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Alju08g1390 659 MobiDBLite consensus disorder prediction 175 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1390 Alju-ChrAlju08 10745320 10749074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1390 1 651 NAC Transcription Factor Family AT1G65910 45.858 1.46e-175 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju08g1390 NAM 2e-40 No_clan