Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1366 ATGGCGGCCGTGGAACCTCCAACCCATGACTTAATTGAACCTGTCAATGATGTCAAGCTCTTCAACCGTTGGAGCTTCGACGATGTTCAGGTGAATGACATATCCTTGGCAGATTACATTGGTGTGGCTCCTGCCAAGCATGCAACCTATGTGCCTCACACCGCTGGGAGATATTCAGTTAAGCGTTTCAGGAAAGCTCAATGCCCTATTGTGGAGAGGCTTACCAACTCTCTTATGATGCATGGGCGAAACAATGGGAAAAAGCTGATGGCAGTGAGGATCATTAAGCATGCCATGGAAATCATCCACTTGCTCACTGATCAAAATCCAATCCAAGTTATTGTTGATGCTGTGATCAACAGTGGGCCAAGAGAAGATGCTACACGAATTGGGTCTGCCGGTGTTGTCAGACGTCAGGCAGTGGATATTTCTCCCCTACGTCGTGTGAATCAGGCTATCTATCTCCTTACTACAGGTGCTCGTGAGTCTGCATTTAGGAACATTAAGACAATTGCAGAGTGTTTGGCTGATGAACTTATCAACGCTGCAAAGGGATCATCAAACAGCTATGCCATTAAGAAGAAGGACGAGATTGAGAGAGTTGCCAAGGCTAACCGTTGA 621 0.4654 MAAVEPPTHDLIEPVNDVKLFNRWSFDDVQVNDISLADYIGVAPAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1366 206 PANTHER RIBOSOMAL PROTEIN S7 6 206 IPR000235 GO:0006412
Alju08g1366 206 NCBIfam 30S ribosomal protein S7 18 206 IPR005716 GO:0003735|GO:0006412|GO:0015935
Alju08g1366 206 ProSitePatterns Ribosomal protein S7 signature. 72 98 IPR020606 GO:0003723|GO:0003735|GO:0006412
Alju08g1366 206 CDD uS7_Eukaryote 19 206 IPR005716 GO:0003735|GO:0006412|GO:0015935
Alju08g1366 206 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 3 206 IPR000235 GO:0006412
Alju08g1366 206 FunFam 40S ribosomal protein S5 2 206 - -
Alju08g1366 206 Gene3D Ribosomal protein S7 domain 3 206 IPR036823 -
Alju08g1366 206 Pfam Ribosomal protein S7p/S5e 60 206 IPR023798 -
Alju08g1366 206 SUPERFAMILY Ribosomal protein S7 19 206 IPR036823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1366 Alju-ChrAlju08 10513722 10515618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1366 16 206 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 92.147 1.53e-134 374