Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1350 ATGCGCAGTGAATTAAGATATGAGATAGATAAAGTCACTGCTAGGCAAAGAAGAATTAGGGAGGAACTGTCCAATCAGAGTGCAGAAACTTCAAACCTGACCAACAAACTTGATAGAAATCATCATGCTTTAATGTTTAAATCTAATGAAAAATCTGTTGGTCATCTGCTTTCTCAAATCACCATTGATAGCCAGGCTCAATGGTTTGTAGACGGTCAGGCGGCGTTTGATGTCATTTCTTCTTCAATTGAGGAAGCAAAATTGGAGTGTCCTTTTCACTCTCATGTTTCGTCAAGGCTTGATAATTTGCTAGAAGTAAAGGCTAAGCAAGGGGTTCAGTATTTGCTACCTGGTCAGAAATGTACCACTGTTGCGATTTCAAAATCCGGTCGTTCTCGATCATGTTTACCTTTTCTTCCGGTTTCATCTGCCACTCAGAAATTGGATAGCTCTGTTTGGCCCAAGAGGTCTGGCTTAAAGAAATATTATTTATCAGAAGTCCGACGACTTCTGGTTATCGGGATGTATCTTTCGAAGGTCTGGCAGTATGAAGCTGTATTCAGCTTATGGTTCTGTTGCTGGTTGCTTCTGGTTACTGCGCAGGGTTCTGTCACTGACCCCGATGAAGTTGACGCATTGAGAGCCATCAAAGGGCGTTTGATTGATCTTAATGGAAATCTGAACACCTGGAATGGTGGAGATCCATGTACATCTAAATGGAGAGGGGTTCATTGTTTCAGTATTCCACGGGCTGATAACTATTTACATGTTCAAGAACTGCGACTACTGCATTTGAACTTGTCTGGAACTTTGGCACCAGAGATTGGAAATTTATCTTATATGGAAATATTGGACTTTATGTGGAACAAGATGGGTGGGAGCATACCAAAGGAAATTGGCAACATCAAAAGTTTGCGACTCTTGCTTCTAAATGGAAACAACTTAACAGGTCGGCTGCCCGAAGAGCTTGGTTATCTTCCAAGTCTGAATAGAATGCAAATTGATGAGAACAATATAACAGGACCTATTCCTACATCGTTTGCAAAACTAAACAGTACAAGCCACTTTCACATGAACAATAACTCACTTACTGGACCAATCCCTCGAGAGTTTTCCCGTTTGTCAAGACTTATTCACCTCCTTCTTGACCATAACAAGTTATCAGGAGATCTTCCACACGAGCTCTCCCAGATGCCAAGCATACGCATAATCCAGCTTGATAACAACGATTTTGGCGGGGCTACCATTCCAGATTCATATGGCAACATTACAACATTGTTGAAGTTGAGCCTTAGGAACTGCAACTTGCAAGGACCAATTCCTGATTTTAGCAGGATAACAGACCTTCTTTATCTTGACCTCAGTTCCAATCAATTGAATGAATCAATTCCTTCTAATAAGCTTTCTGAAAGAGTCACAACAATTGATTTGTCAAACAACAAGCTGACTGGAAATATTCCACCCAACTTTTCTGCTCTCCCAAATCTTCAACTATTGTCACTTTCAAACAATTCGTTGAATGGCAGTGTTCTTTCCACCCTTTGGCAGGACAAGACTTCAAATGGAATGGAAAGATTGATCTTGGATTTTCAAAATAATAATCTTTTAGGCATATCAGGCACTATTGACCTCCCCCCTAACATCACACTCAGGCTTGAGGGAAATCCTCTTTGTTCCAATAACACTCTAGTTCATCTATGTGGATCTGCAAGTGACAATGACACGAACCACTTGAGTCTGACGGACTCAACTGTTAACTGCCCCCCTCAAGAATGCCTTCCTCCTTATGAATATTCCAAAACATCTTCTGTAAAGTGTTTTTGTGCAGCGCCTTTGCTCATTGATTATCGACTGAAAAGTCCTGGGTTTTACGAGTTTCATCCATTCCAGACAATATTTGAGAACTTCCTGGCATCCAATTATACTTTAATGATTAACCAGGTTGATATTGGCGCTCCTGAATGGGAAGGACTTCGACTGAAAATGAACTTGAAGCTTTTTCCGGAACCCATTGATAACAAAAGCGCCCTTACTTTCAATGAAAGCGAGGTTCAGCGTCTTTATAGCATGTTCACAGGATGGAATGTTTCAGATAATGAGTTTTTCGGACCTTATGAACTGCTCGACTTCCCTCTTGTGGGTCCTTACAAGGATATGTTGTTTGGCCCCACTACAAGTTCAGGGATAAGCAAGGGAGCACTGGCTGGCATTATCTTAGGGACAATTGCCGGTGCAGTTACGTTATCTGCAATTGTGACTCTTCTTATCTTGAGGGCGCGGATGAGAGATTACCATGCACTTTCATCAAGCCGACGCTTTTCTAGAATATCAATAAGAATTGATGGCGTGCGGAGCTTAACTTTTGAAGAAATGGCCTTGGCTACTAACAATTTTAGTGACTCCAGTCAAGTTGGTCAAGGGGGTTATGGGAAAGTTTATAGAGGTACTCTCACCGATGGCACTGTTGTAGCAATTAAACGTGCGCAGGTGGGATCACTGCAAGGCCAGAGGGAGTTCCTAACAGAAATACAGTTACTATCAAGGTTACATCATCGCAACCTCGTCACTTTGGTTGGATACTGTGATGAAGGAGGTGAACAGATGCTGGTTTATGAATTTATGCCAAATGGTACGCTAAGGGATCATCTTTCTGCTGGTCCGAAAAAACCTCTGAGTTTTGATACGAGATTGAGGATTGCACTAGGATCAGCCAAGGGCATCCTGTATCTACATACAGAAGCTGATCCTCCAATATTCCACCGAGATGTCAAGGCCAGCAACATATTATTGGACTCCAGGTTAAATGCAAAAGTTGCTGATTTTGGACTTTCACGGCTTGCTCCAGTTCCAGATACTGAAGGAATTGTACCTGGCCATGTATCTACAGTGGTAAAAGGAACCCCGGGCTACCTTGACCCAGAGTACTTTTTAACGCATAAGTTGACTGACAAGAGTGATGTTTATAGTTTTGGTGTTGTCCTTCTGGAGCTTTTGACAGGGAAGCCACCGATCTCACATGGCAAAAATCTTGTTAGAGAGGTTACTGTTGCATACCAATCTGGTGAAGTATTCTCGGTGATTGATGGACGAATGGGGCCCTATCCTTCTGAGCACATAGGGAAGTTCTTGGACCTGGCCCTCAAGTGTAGCAAAGACGAGCCCGATGCACGACCTAGAATGGCAGAAGTGGCTCGGGAGCTTGAAAATATGTGGTCCATGATGCCGGAGTCCAATGCCAGGATACCTGAATATATATCCAGTGATTCTGGAAAATTATTCAGTAGTTCAACACCATCTTCGTCCTCTGTTAGCAAAACTCCTTTTATATCGGGAGACATGTCTGGTAGCGAACTTGTTAGTGGGGTAGAGCCAACCATCAGGCCAAGGTAG 3390 0.426 MRSELRYEIDKVTARQRRIREELSNQSAETSNLTNKLDRNHHALMFKSNEKSVGHLLSQITIDSQAQWFVDGQAAFDVISSSIEEAKLECPFHSHVSSRLDNLLEVKAKQGVQYLLPGQKCTTVAISKSGRSRSCLPFLPVSSATQKLDSSVWPKRSGLKKYYLSEVRRLLVIGMYLSKVWQYEAVFSLWFCCWLLLVTAQGSVTDPDEVDALRAIKGRLIDLNGNLNTWNGGDPCTSKWRGVHCFSIPRADNYLHVQELRLLHLNLSGTLAPEIGNLSYMEILDFMWNKMGGSIPKEIGNIKSLRLLLLNGNNLTGRLPEELGYLPSLNRMQIDENNITGPIPTSFAKLNSTSHFHMNNNSLTGPIPREFSRLSRLIHLLLDHNKLSGDLPHELSQMPSIRIIQLDNNDFGGATIPDSYGNITTLLKLSLRNCNLQGPIPDFSRITDLLYLDLSSNQLNESIPSNKLSERVTTIDLSNNKLTGNIPPNFSALPNLQLLSLSNNSLNGSVLSTLWQDKTSNGMERLILDFQNNNLLGISGTIDLPPNITLRLEGNPLCSNNTLVHLCGSASDNDTNHLSLTDSTVNCPPQECLPPYEYSKTSSVKCFCAAPLLIDYRLKSPGFYEFHPFQTIFENFLASNYTLMINQVDIGAPEWEGLRLKMNLKLFPEPIDNKSALTFNESEVQRLYSMFTGWNVSDNEFFGPYELLDFPLVGPYKDMLFGPTTSSGISKGALAGIILGTIAGAVTLSAIVTLLILRARMRDYHALSSSRRFSRISIRIDGVRSLTFEEMALATNNFSDSSQVGQGGYGKVYRGTLTDGTVVAIKRAQVGSLQGQREFLTEIQLLSRLHHRNLVTLVGYCDEGGEQMLVYEFMPNGTLRDHLSAGPKKPLSFDTRLRIALGSAKGILYLHTEADPPIFHRDVKASNILLDSRLNAKVADFGLSRLAPVPDTEGIVPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSFGVVLLELLTGKPPISHGKNLVREVTVAYQSGEVFSVIDGRMGPYPSEHIGKFLDLALKCSKDEPDARPRMAEVARELENMWSMMPESNARIPEYISSDSGKLFSSSTPSSSSVSKTPFISGDMSGSELVSGVEPTIRPR 1129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1350 1129 SUPERFAMILY Protein kinase-like (PK-like) 784 1098 IPR011009 -
Alju08g1350 1129 ProSitePatterns Protein kinases ATP-binding region signature. 804 826 IPR017441 GO:0005524
Alju08g1350 1129 SMART serkin_6 798 1073 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1350 1129 MobiDBLite consensus disorder prediction 1089 1129 - -
Alju08g1350 1129 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 874 1083 - -
Alju08g1350 1129 PRINTS Leucine-rich repeat signature 449 462 - -
Alju08g1350 1129 PRINTS Leucine-rich repeat signature 493 506 - -
Alju08g1350 1129 Coils Coil 9 29 - -
Alju08g1350 1129 PANTHER RECEPTOR-LIKE PROTEIN 55 217 1071 - -
Alju08g1350 1129 ProSiteProfiles Protein kinase domain profile. 798 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1350 1129 Gene3D Phosphorylase Kinase; domain 1 761 873 - -
Alju08g1350 1129 FunFam Leucine-rich repeat protein kinase family protein 762 873 - -
Alju08g1350 1129 Gene3D Transferase(Phosphotransferase) domain 1 874 1084 - -
Alju08g1350 1129 Gene3D Ribonuclease Inhibitor 205 470 IPR032675 -
Alju08g1350 1129 CDD STKc_IRAK 804 1070 - -
Alju08g1350 1129 MobiDBLite consensus disorder prediction 1089 1113 - -
Alju08g1350 1129 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 207 368 - -
Alju08g1350 1129 SUPERFAMILY L domain-like 221 566 - -
Alju08g1350 1129 Pfam Leucine rich repeat N-terminal domain 207 245 IPR013210 -
Alju08g1350 1129 ProSitePatterns Serine/Threonine protein kinases active-site signature. 918 930 IPR008271 GO:0004672|GO:0006468
Alju08g1350 1129 Gene3D Ribonuclease Inhibitor 471 561 IPR032675 -
Alju08g1350 1129 Pfam Protein tyrosine and serine/threonine kinase 802 1067 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1350 Alju-ChrAlju08 10382307 10398617 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1350 192 1081 Receptor kinase-like Gene Family AT5G01950 56.299 0.0 944
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Alju08g1350 PK_Tyr_Ser-Thr 9.1e-46 CL0016