Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1348 ATGTTTCGCCCAAGTTTGCCGCCAAAAATTTCATATTTGCTACCTGGTCAGAAATTTATCACTGTTGCGATTTCAAACTCCGGTCGTTCTCGATCATGTTTAACTTTTCTTCCGCAGGTTTCATCTGCCACTCAGAAATTGGGTAGCTCTGTTTGGCCCAAGAGGTCTGGCTTAAAGCCTTCTGATTTTCTTGTTTTGCTAAATATATCAGAAGTCCGACGACTTCTGGTTATCCGGATGTATCTTTCGAAGGTCTGGCTGTATGAAGCTGTATTCAACTTATGGTTCTGTTGCTGGTTGCTTCTGGTTACCGCTCAGGGTTCTGTCACTGACCCCGATGAAGTTGACGCATTGAGAGCCATCAAAGGGCGTTTGATTGATCTTAATGGAAATCTGAACACCTGGAATGGTGGAGATCCATGTACATCTAAATGGAGAGGGGTTCATTGTTTCAGTAGTCCACGGGCTGATAACTATTTACATGTTCAAGAACTGCGACTACTGAATTTGAACTTGTCTGGAACTTTGGCACCAGAGATTGGAAATTTATCTTATATGGAAATATTGGACTTTATGTGGAACAATATAGGTGGGCGCATACCAAAGGAAATTGGCAACATCAAAAGTTTGCAACTCTTGCTTCTAAATGGAAACAACTTAACAGGTCGGCTGCCAGAAGAGCTTGGTTATCTTCCAAATCTGAATAGAATGCAAATTGATGAGAACAATATAACAGGACCTATTCCTACATCGTTTGCAAAACTAAACAGCGCAAAGCACTTTCACATGAACAATAACTCACTTACTGGACCAATCCCTCGAGAGTTTTCCCGCTTGTCAAGACTTATTCACCTCCTTCTTGACCATAACAAGTTATCAGGAGATCTTCCACACGAGCTCTCCCAGATGCCAAGCATACGTATAATCCAGCTTGATAACAACGATTTTGGCGGGGCTACCATTCCAGATTCATATGGCAACATTACAACATTGTTGAAGTTGAGCCTTAGGAACTGCAACTTGCAAGGACCAATTCCTGATTTTAGCAGGATACCGAACCTTCTTTATCTTGACTTTAGTTCGAATCAATTGAATGAATCAATTCCTTCTAATAAGCTTTCTGAAAGAGTCACAACCATTGATTTGTCAAACAACAAGCTAACTGGAAATATTCCACCCAACTTTTCTGCTCTCCCAAATCTTCAACTATTGTCATTTTCAAACAATTCGTTGAATGGCAGTGTTCTTTCCACCCTTTGGCAGGACAGGACTTCAAATGGAATGGAAAGATTGATCTTGGATTTTCAAAATAATAATCTTTTAGGCATATCAGGCACTATTGACCTCCCCCCTAACATCACACTGAGGCTTGAGGGAAATCCTCTTTGTTCCAATAACACTCTAGTTCATCTATGTGGATCTGCAAGTGACAATGACACGAACCACTTGAGTCTGACGGACTCAACTGTTAACTGCCCCCCTCAAGAATGCCTTCCTCCTTATGAATATTCCAAAACATCTTCTGTAAAGTGTTTTTGTGCAGCGCCTTTGCTCATTGATTATCGACTGAAAAGTCCTGGGTTTTACGAGTTTCATCCATTCCGGACAAAATTTGAGAACTTCCTGGCATCCAATTATACTTTAATGATTAACCAGGTTGATATTGGCGCTCCTGAATGGGAAGGACTTCGACTGAAAATGAACTTGAAGCTTTTTCCGGAACCCATTGATAACAAAAGCTCCCCTACTTTCAATGAAAGCGAGGTTCAGCGTCTTTATCGCTTGTTCACAGGATGGGTTTTTTCAGAGAATGAGTTTTTCGGACCTTATGAACTGCTCGACTTCCCTCTTGTAGGTCCTTACAAGGATATGTTGTATGGCTCCAGTACAAGTTCAGGGATAAGCAGGGGAGCACTGGCTGGCATTATCTTAGGGACAATTGCCGGTGCAGTTACGTTATCTGCAATTGTGACTCTTCTTATCTTGAGGGCGCGGATGAGAGATTACCATGCACTTTCATCAAGCCGACGCTTTTATAGAATATCAATAAGAATTGATGGCGTGCGGAGCTTCACTTTTGAAGAAATGGCCTTGGCTACTAACAATTTTAGTGACTCCAGTCAAGTTGGTCAAGGGGGTTATGGGAAAGTTTATAGAGGTACTCTCACCGATGGCACTGTTGTAGCAATTAAACGTGCGCAGGTGGGATCACTGCAAGGCCAGAGGGAGTTCCTAACAGAAATACAGTTACTATCAAGGTTACATCATCGCAACCTTGTCACTTTGGTTGGATACTGTGATGAAGGAGGTGAACAGATGCTGGTTTATGAATTTATGCCAAATGGCACACTAAGGGATCATCTTTCTGCTGATCCCAAACAACCTCTGAGTTTTGATATGAGATTGAGGATTGCACTAGGATCAGCCAAGGGCATCCTGTATCTACATACGGAAGCTGATCCTCCAATATTCCACCGAGATGTCAAGGCCAGCAACATATTATTGGATTCCAGGTTAAATGCAAAAGTTGCTGATTTTGGACTTTCACGGCTTGCTCCAGTTCCAGATATTGAAGGAATTGTACCTGGCCATGTATCTACAGTGGTAAAAGGAACCCCGGGCTACCTTGACCCAGAGTACTTTTTAACGCATAAGTTGACTGACAAGAGTGATGTTTATAGTTTTGGTGTTGTCCTTCTGGAGCTTTTGACAGGGAAGCCACCGATCTCACATGGCAAAAATCTTGTTAGAGAGGTTACTGTTGCATACCAATCTGGTGAAGTATTCTCGGTGATTGATGGACGAATGGGGCCCTATCCTTCTGAGCACATAGGGAAGTTCTTGGACCTGGCCCTCAAGTGTAGCAAAGACGAGCCCGACGCACGACCTAGAATGGCAGAAGTGGCTCGGGAGCTTGAAAATATGTGGTCCATGATGCCGGCGTCCAATGCCAGGATACCTGAATATATATCCAGTGATTCTGGAAAATTATTCAGTAGTTCAACACCATCTTCGTCCTCTGTTAGCAAAACTCCTTTCATATCGGGAGACATGTCTGGTAGCGAACTTGTTAGTGGGGTAGAGCCAACCATCAGGCCAAGGTAG 3105 0.4287 MFRPSLPPKISYLLPGQKFITVAISNSGRSRSCLTFLPQVSSATQKLGSSVWPKRSGLKPSDFLVLLNISEVRRLLVIRMYLSKVWLYEAVFNLWFCCWLLLVTAQGSVTDPDEVDALRAIKGRLIDLNGNLNTWNGGDPCTSKWRGVHCFSSPRADNYLHVQELRLLNLNLSGTLAPEIGNLSYMEILDFMWNNIGGRIPKEIGNIKSLQLLLLNGNNLTGRLPEELGYLPNLNRMQIDENNITGPIPTSFAKLNSAKHFHMNNNSLTGPIPREFSRLSRLIHLLLDHNKLSGDLPHELSQMPSIRIIQLDNNDFGGATIPDSYGNITTLLKLSLRNCNLQGPIPDFSRIPNLLYLDFSSNQLNESIPSNKLSERVTTIDLSNNKLTGNIPPNFSALPNLQLLSFSNNSLNGSVLSTLWQDRTSNGMERLILDFQNNNLLGISGTIDLPPNITLRLEGNPLCSNNTLVHLCGSASDNDTNHLSLTDSTVNCPPQECLPPYEYSKTSSVKCFCAAPLLIDYRLKSPGFYEFHPFRTKFENFLASNYTLMINQVDIGAPEWEGLRLKMNLKLFPEPIDNKSSPTFNESEVQRLYRLFTGWVFSENEFFGPYELLDFPLVGPYKDMLYGSSTSSGISRGALAGIILGTIAGAVTLSAIVTLLILRARMRDYHALSSSRRFYRISIRIDGVRSFTFEEMALATNNFSDSSQVGQGGYGKVYRGTLTDGTVVAIKRAQVGSLQGQREFLTEIQLLSRLHHRNLVTLVGYCDEGGEQMLVYEFMPNGTLRDHLSADPKQPLSFDMRLRIALGSAKGILYLHTEADPPIFHRDVKASNILLDSRLNAKVADFGLSRLAPVPDIEGIVPGHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSFGVVLLELLTGKPPISHGKNLVREVTVAYQSGEVFSVIDGRMGPYPSEHIGKFLDLALKCSKDEPDARPRMAEVARELENMWSMMPASNARIPEYISSDSGKLFSSSTPSSSSVSKTPFISGDMSGSELVSGVEPTIRPR 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1348 1034 MobiDBLite consensus disorder prediction 994 1018 - -
Alju08g1348 1034 Pfam Leucine rich repeat N-terminal domain 112 150 IPR013210 -
Alju08g1348 1034 Gene3D Ribonuclease Inhibitor 270 373 IPR032675 -
Alju08g1348 1034 FunFam Leucine-rich repeat protein kinase family protein 668 778 - -
Alju08g1348 1034 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 112 273 - -
Alju08g1348 1034 CDD STKc_IRAK 709 975 - -
Alju08g1348 1034 Pfam Protein tyrosine and serine/threonine kinase 707 972 IPR001245 GO:0004672|GO:0006468
Alju08g1348 1034 SUPERFAMILY L domain-like 126 472 - -
Alju08g1348 1034 SMART serkin_6 703 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1348 1034 ProSitePatterns Serine/Threonine protein kinases active-site signature. 823 835 IPR008271 GO:0004672|GO:0006468
Alju08g1348 1034 Gene3D Transferase(Phosphotransferase) domain 1 779 987 - -
Alju08g1348 1034 Pfam Leucine rich repeat 232 292 IPR001611 GO:0005515
Alju08g1348 1034 Gene3D Ribonuclease Inhibitor 374 466 IPR032675 -
Alju08g1348 1034 ProSitePatterns Protein kinases ATP-binding region signature. 709 731 IPR017441 GO:0005524
Alju08g1348 1034 Gene3D Ribonuclease Inhibitor 112 269 IPR032675 -
Alju08g1348 1034 ProSiteProfiles Protein kinase domain profile. 703 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1348 1034 Gene3D Phosphorylase Kinase; domain 1 676 778 - -
Alju08g1348 1034 SUPERFAMILY Protein kinase-like (PK-like) 688 1003 IPR011009 -
Alju08g1348 1034 PANTHER RECEPTOR-LIKE PROTEIN 55 122 976 - -
Alju08g1348 1034 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 779 988 - -
Alju08g1348 1034 MobiDBLite consensus disorder prediction 994 1034 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1348 Alju-ChrAlju08 10367358 10375865 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1348 97 986 Receptor kinase-like Gene Family AT5G01950 56.745 0.0 954
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Alju08g1348 PK_Tyr_Ser-Thr 1.1e-45 CL0016