Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju08g1330 | ATGCTTAAACACGTATTACCTATTGGCATGGAGCAGAGCTGCGGGGCCCAGATAAGACTCGGGGTTCCACCAGTAGCTAGGGCAGGATGTGCTACAGCACGCACACAATATGCATTCGTACATTCCGTCAAGCTTAGCCCTACCCTTCTTGCTCTGAGGCAAATGAGTGATCGTGGTTTCAGAGCCCGCAGGGATCTTGGTCAAGCAAGCCAAGCCATTGCAGCCATCAATGTTCATGGAATAGGAGCCGCAGATTCCCTCTCGGCAGGACCTGCGGAAAGTGAGGGTGGGATCGATCTCGTTCTTGATTTTGATCAAGGCGTCGAGGACCATGGGCCCACATTGTTGGAGATTGATCTGGTACTCCTGAAGCTGAGTGAAATTTCGTGTTTGAGGGGTTTGGTTCCAGAGATTTGCGTGGGTAAGGAAGAGATATTCTGTGGTTCAGAGAGTGATTTGTTTTTTAAATTTATGGGGTCCGAGGTCTGTGTTGGTGTATCTGGTGGGTCCGCCACTTCTCATGAATGGAAAAAGGGGTGGCTTCTTCCATATGGTGGATTTGCTCAATATTGTAACAACTGCGGAATTTCAACCGAATGCAAGCTTGACACTCTTGATTCCATATCTGCCAATGAGGCATCCATTTTCTGTAGTAAATTCCACCGTGAAGAAACTGGTTGGAGGGATTGCAGCTTTTGCAACAAGCCTATCCACAGTGGATGCATAGTATCTAGGCATTTATTCAACTACCTTGACTTTGGAGGTATAGGTTGCATCAGCTGCATAAAGGCTTCTCAATCGCGTTTGAACACTAAAGAACCTAATGGGGCTGTTACATCTACCATGACAAATGCAAGTGATTGTCCCCCTCTTCATATTGATGGGAAACGGTTGGTGGATAGTGTTGATGAAGGAAAACTGATGCAGTTATGCAGAATTGTCGAAGCTAGTGGGACTAATGGTTGGCATCAGCCTCAGAGAGATAAAATGATTTCATCTAGTGGGTCAAAGAGCCAAAATATTAAGTGCCTAACAGGGGATATGGATTCAAGATTTTCAAATATGATTGCACCATGTATTCAGTCATTAAAATTTCGTTTATTAGAAAATAGTAGACCAAAGTGGGAGATTAAAAATATTTGTGAACCACTCACACAACCATCTTTGAGTATGTCCCTGGGAATTCCATCAGGAAACTCTGCCCCTGCTTCTGCTGGCGAGATTGTAGAAGAAAGGCTTGAGGGCAAACCATCTTCTCTGTTTCATCAAGGGCAAAGATCTCATCCTGTATTCGCTAAACCATCAAAGACTGGTCTTTCCATGAACATAGAAACAAATAAAGGAATGAATTCTATTTCGAAGGCACGTGTTGGCCGGCCACCTGTTGAAGGAAGGGGCAAGAGTCAGCTACTTCCTCGGTACTGGCCTAGGTATACTGATGAAGAGCTGAAGCAATTGTCTGGAAATTTGAAATCCACTGTAGTGCCATTATTTGAGAAGGTGCTGAGTGCCAGTGATGCAGGTCGAATTGGGCGCCTTGTCCTTCCAAAAGCTTGTGCTGAAGCTTTTTTCCCTCCTATCTGTCAATCAGAAGGTCTTCCTTTGGAAATACTAGACGTGAAGGGGAATGAATGGACATTTCAGTTCAGATATTGGCCTAATAACAACAGCAGGATGTATGTATTGGAGGGTGTGACCCCTTGCATACAGTCAATGCAATTGATTGCGGGTGATACTGTGACATTTAGTAGGATAGATCCTGGGGGCAGACTTATTATGGGTTTCAGAAAGACAGCAATTAGTCTGGAACCACAGGATGCATCTACATCTGGACATTCTAATGGGATTACAATAAGGGAAACAGCCATTTCTGGTGCAACTGAGAACCTGCCCTCAGGAAGTGGTTATTCTGATCTTCTTCAATCTATGGAAGAGAACAGGGAACCTCACTTAAATAGACAGTCAGAACACCTGCATTCGGGTAGCAGGGTGGCTGATTTTACCCAAACGGAAAATTATGGCCAGATGACAAAAAATGATTCACGGCAGCTACCAATTTCAGTTTCAGAGAAGAAAAGGACTCGGAATATTGGGCCTAAGAGTAAGAGGTTGCTCATTAATTGTGAAGATGCTTTGGAGTTGAGACTAACATGGGAGGAAGCACAAGATTTACTTCGTCCACCACCTAGTGTTGAGCCAATCATTGTCACAATTGAGGACCACATTTTTGAGGAGTACAATGAACCCCCAGTTTTTGGGAAGAGAACTATATTCAGTGCCTGCCCATCTGGGGGACAAGAACAATGGGTTTCATGTGATGATTGCTCTAAATGGCGAAAATTGCCTGTAGATGCTCTTTTACCACCTAAGTGGACTTGTTCTAAAAATGTCTGGGATCCAACCAGGTCTTCATGTTCTGCACCGGAGGAGCTAGGACCCAAGGAATTGGAAGATCTTTTGAAATCCAGCAAAGACTTTAAAAAGCGAAGATTAACAGAAAATAATAAGTCACTCCAAGAATTTGAACCTTCAGGCCTTGATGCTCTTGCTAATGTGGCAGTGTTGGGAGATAGTGTCGGAGATCCTTGCGAGTCATCAGCCGGACCCACCACCAAACATCCTAGACATCGTGCCGGCTGCACCTGCATTGTCTGCATTCAGCCACCAAGTGGAAAGGGAAGACATCATTCCACCTGTACTTGCAACGTGTGCATGACTGTGAAAAGGCGGTTCAACACCCTCATGCTGCGTAAGAAGAAACGGCAATCCGATGCTAACCAGATGGATCATAGAGAAGAGTCTGGTATGAATGGAGCACCTAGGGAAGACACAAGTCATGTGGAGAAAGAAGCGAGCATAAAAAGAAGAAAGCTCGAGGCGGGCGAATCCAGTGCTGTGCAGATAGATCTGAATAGCCATCCTGATCGTGAAGACATGCAAGTTAATGCATCAAGCATGAATGGTCATCTTGGAGCTCCAAACTATCCACTTCCTGTATATATGGATCAAAATGGCCCTAATGGAGGTCACGGGTACTTCTCTAATGGGGGAAGCTTTGGACCAGTTATCTGGGAGAAGGAAAGAACAGAAGATAAGGCATCCTGTGATCCCAAATCATGTCAGAACAATCATCCTTGA | 3138 | 0.4481 | MLKHVLPIGMEQSCGAQIRLGVPPVARAGCATARTQYAFVHSVKLSPTLLALRQMSDRGFRARRDLGQASQAIAAINVHGIGAADSLSAGPAESEGGIDLVLDFDQGVEDHGPTLLEIDLVLLKLSEISCLRGLVPEICVGKEEIFCGSESDLFFKFMGSEVCVGVSGGSATSHEWKKGWLLPYGGFAQYCNNCGISTECKLDTLDSISANEASIFCSKFHREETGWRDCSFCNKPIHSGCIVSRHLFNYLDFGGIGCISCIKASQSRLNTKEPNGAVTSTMTNASDCPPLHIDGKRLVDSVDEGKLMQLCRIVEASGTNGWHQPQRDKMISSSGSKSQNIKCLTGDMDSRFSNMIAPCIQSLKFRLLENSRPKWEIKNICEPLTQPSLSMSLGIPSGNSAPASAGEIVEERLEGKPSSLFHQGQRSHPVFAKPSKTGLSMNIETNKGMNSISKARVGRPPVEGRGKSQLLPRYWPRYTDEELKQLSGNLKSTVVPLFEKVLSASDAGRIGRLVLPKACAEAFFPPICQSEGLPLEILDVKGNEWTFQFRYWPNNNSRMYVLEGVTPCIQSMQLIAGDTVTFSRIDPGGRLIMGFRKTAISLEPQDASTSGHSNGITIRETAISGATENLPSGSGYSDLLQSMEENREPHLNRQSEHLHSGSRVADFTQTENYGQMTKNDSRQLPISVSEKKRTRNIGPKSKRLLINCEDALELRLTWEEAQDLLRPPPSVEPIIVTIEDHIFEEYNEPPVFGKRTIFSACPSGGQEQWVSCDDCSKWRKLPVDALLPPKWTCSKNVWDPTRSSCSAPEELGPKELEDLLKSSKDFKKRRLTENNKSLQEFEPSGLDALANVAVLGDSVGDPCESSAGPTTKHPRHRAGCTCIVCIQPPSGKGRHHSTCTCNVCMTVKRRFNTLMLRKKKRQSDANQMDHREESGMNGAPREDTSHVEKEASIKRRKLEAGESSAVQIDLNSHPDREDMQVNASSMNGHLGAPNYPLPVYMDQNGPNGGHGYFSNGGSFGPVIWEKERTEDKASCDPKSCQNNHP | 1045 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju08g1330 | 1045 | ProSiteProfiles | Zinc finger CW-type profile. | 763 | 813 | IPR011124 | GO:0008270 | |
| Alju08g1330 | 1045 | Gene3D | - | 476 | 600 | IPR015300 | - | |
| Alju08g1330 | 1045 | MobiDBLite | consensus disorder prediction | 917 | 962 | - | - | |
| Alju08g1330 | 1045 | Pfam | CW-type Zinc Finger | 768 | 810 | IPR011124 | GO:0008270 | |
| Alju08g1330 | 1045 | FunFam | B3 domain-containing transcription repressor VAL1 | 476 | 603 | - | - | |
| Alju08g1330 | 1045 | MobiDBLite | consensus disorder prediction | 917 | 965 | - | - | |
| Alju08g1330 | 1045 | Pfam | B3 DNA binding domain | 498 | 596 | IPR003340 | GO:0003677 | |
| Alju08g1330 | 1045 | ProSiteProfiles | B3 DNA-binding domain profile. | 498 | 599 | IPR003340 | GO:0003677 | |
| Alju08g1330 | 1045 | SMART | B3_2 | 498 | 598 | IPR003340 | GO:0003677 | |
| Alju08g1330 | 1045 | Gene3D | - | 766 | 821 | - | - |
Showing 1 to 10 of 14 entries
Duplication type information
Functional genes information
Transcription factors information
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Alju08g1330 | 08 | 10159374 | 10168840 | Alju07g0860 | 07 | 22175795 | 22184577 | CCT | |
| Alju08g1330 | 08 | 10159374 | 10168840 | Alju08g1330 | 08 | 10159374 | 10168840 | ECH |
Showing 1 to 2 of 2 entries