Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1313 ATGCAAGATCCACCTTCAAACCCTAACCCCAATCCCTCTTCTCACAATGCCAATGCCAATGCCGCTTCTCAATTCCCGCCACCGCCTCCCGCCGCTGCCGTTTCCCCGCCGAAGGCGACTCCTGCCGCCTCCTCTTCGTCTTCTTCGCTCTTCATGAGGGGAGGAGCCGCCGCCACCGGCGTTGGTGGGGCCCACCCACTCCACCACCACCACAGGAGGGCCCACTCCGAGGTTAACTTCCGGTTGCCTGATGACATGATGGATCTGTCGCCGTCCGATCCGTTCAATGGCGGTTCATCCACGGCTAGTCTTGAAGAGATCGGATCCGAGGATGACCTCTTCTCTACTTACATTGATGTTGACAAACTCGGAGGTGCTAACGGATCGGGAAGTGGTGGCAATGGATCAGATCAGACTGGCAATGGGAATGGGAATGGCGTCGGCACAAGCAACCAGAATGAAAGCGAGAAGAGCCCGAGTGCAAGGCCAAGACACAGGCATAGTAGCTCCGTGGACGGGTCGACTTCTACAAGTATGTTTGGAGAGATTATGGAGGCAAAGAAAGCTATGCCTCCAGATAAGTTAGCTGAACTGTGGACGATTGATCCCAAGCGTGCCAAGAGAATCCTAGCAAATCGACAATCTGCTGCTCGTTCAAAAGAGAGGAAAGCTCGTTATATTCAAGAACTTGAGCGCAAAGTTCAGACCCTTCAGACTGAAGCCACAACTCTTTCTGCCCAACTTACACTGTACCAGAGGGACACAACAGGTCTGAGCACTGAAAATACAGAGCTTAAGCTTCGTCTGCAAGCCATGGAACAACAGGCACAGCTTCGAGATGCTCTAAATGAAGCATTGAAAAAGGAAGTTGAGAGACTTAAGATTGCAACAGGGGAGATGATAAGCCCGTCCGAATCATTTAATCTGGGAATGCACCAGATGCAATTTACAGCTTCAAACTTCTTTCCACTTCCGCCTCAGTCAGGGCCTCCTGGTCACCAGAGCATGCAGTTGCCATCATTCAATCACTCTCCTAGTATGGCAGCTCATCAACATCAACATCAACATCAACTGCAACAAACAAACTGTCATCATTTCTCTGAAATGATGCAGAATGACCAACTTGGTCGTTTGCAAGGGCTTGATATCAGTAGCAAAGGATCACCCGTTGTGAAGTCTGAAGGCCCCTCACTTTCTGCAAGTGAGAGTAGCACAACATTTTAA 1224 0.5041 MQDPPSNPNPNPSSHNANANAASQFPPPPPAAAVSPPKATPAASSSSSSLFMRGGAAATGVGGAHPLHHHHRRAHSEVNFRLPDDMMDLSPSDPFNGGSSTASLEEIGSEDDLFSTYIDVDKLGGANGSGSGGNGSDQTGNGNGNGVGTSNQNESEKSPSARPRHRHSSSVDGSTSTSMFGEIMEAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKIATGEMISPSESFNLGMHQMQFTASNFFPLPPQSGPPGHQSMQLPSFNHSPSMAAHQHQHQHQLQQTNCHHFSEMMQNDQLGRLQGLDISSKGSPVVKSEGPSLSASESSTTF 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1313 407 Coils Coil 268 299 - -
Alju08g1313 407 MobiDBLite consensus disorder prediction 129 157 - -
Alju08g1313 407 MobiDBLite consensus disorder prediction 380 407 - -
Alju08g1313 407 SMART brlzneu 200 264 IPR004827 GO:0003700|GO:0006355
Alju08g1313 407 CDD bZIP_plant_RF2 205 254 IPR044759 GO:0003700|GO:0006355
Alju08g1313 407 FunFam probable transcription factor PosF21 203 256 - -
Alju08g1313 407 MobiDBLite consensus disorder prediction 1 103 - -
Alju08g1313 407 SUPERFAMILY Leucine zipper domain 204 255 IPR046347 GO:0003700|GO:0006355
Alju08g1313 407 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 15 371 - -
Alju08g1313 407 Gene3D - 203 255 - -
Alju08g1313 407 MobiDBLite consensus disorder prediction 39 53 - -
Alju08g1313 407 MobiDBLite consensus disorder prediction 390 407 - -
Alju08g1313 407 MobiDBLite consensus disorder prediction 127 178 - -
Alju08g1313 407 Pfam bZIP transcription factor 204 259 IPR004827 GO:0003700|GO:0006355
Alju08g1313 407 Coils Coil 220 247 - -
Alju08g1313 407 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 202 265 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1313 Alju-ChrAlju08 9906809 9909313 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1313 1 407 bZIP Transcription Factor Family AT2G40620 50.943 2.60e-104 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Alju08g1313 bZIP_1 6.4e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g1313 08 9906809 9909313 Alju08g1313 08 9906809 9909313 ECH