Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1305 ATGTATGGCAGTAAAGAGCATAAGGATGATATTAAAGGAGACCACGGTTACGTGGAAACTGACCCAAGTGGTCGATATGGCAGGTTTGGAGAAATTCTTGGAAAAGGAGCAATGAAGACAGTATACAAAGCTATTGACGAGGTTCTTGGAATAGAGGTAGCATGGAACCAGGTCAGACTCAATGAGGCACTTCGCACACCAGATGATTTGCAGCGGCTTTACTCAGAGGTTCATCTTCTCAGTACCCTCAAGCACCAATGCATCATAAGATTCTACACCTCCTGGATTGATATTGAAAACAAGACCTTCAACTTCATCACAGAAATGTTCACTTCAGGGACACTGAGAGAATACAGGAAGAAATATGTGCGAGTAGGCATACAAGCAATAAAGAGTTGGGCTCGCCAAATCTTACAAGGTCTTGTTTACCTACATGACCATGATCCTCCAGTAATTCATAGGGACCTCAAATGCGATAACGTATTTGTCAATGGCCATCTTGGACAAGTGAAAATCGGCGATTTAGGACTAGCGGCTATTCTCCGTGGTTCCCACTCTGCCCACAGTGTTATAGGCACCCCAGAGTTCATGGCTCCAGAATTATATGAAGAAGAATACAATGAACTCGTTGATGTGTACTCATTTGGCATGTGTGTTTTGGAGATGCTTACATCTGAATATCCATATGGTGAATGTGCTAATCCTGCACAGATCTACAAAAAAGTAACATCGGGAAAGTTACCAGCAGCACTTTTTCGGATTGAAGACACAGAAGCACAGAAGTTTGTTAGAAAATGCTTGGTAGCTGCGGCAGATAGACCATCGGCGAAAGAATTATTGCTTGATCCTTTTCTCTCATCTAATGACGCATCCTCAAATACAAAGTTTGAGATTCAAAAGCCACTATTGAATGACATTGAGATAGAAAAGTTGCATTTGACCGATGGTTCACAAAGGACTGGGATGAAAATCACTGGGAAGCTGAATCCAGAGGATGATACAATATTTCTCAAAGTGCAAATTACTGATGAAGATGATTCTGCAAGGAACATTTATTTTCCCTTTGACATTTTAACGGATACTCCCATTGATGTTGCAATGGAGATGGTGAGAGAGTTGGAGATCACCGATTGGGAGCCATTTGAAATCTCTAGTATGATTGAAGCAGAGATATCTGCTCTTCTGCCACAGAGAAGGAAGAGGGACTGTTCAGATACCTTTCATATGTTCAATTATCAGAATGATGACAACAATGAACCTCAATATCATTTTGGCTCATTATCTTCTTGTTCATCATCCTTAGAATCAGTATCAGGCATGGTCACAAAAGCTGAGGAACTACCCAATGGGTATTACTGGCTCCATGATGAATTGATTGATGATTCCAGTTCCCGATGCTCTTCACAGGGGACATATTCAAACTTGAATTATGCTTCTGCTGATGACCAGGAGCAAAATGTGACTTCTACCAGAAAAGATAAACCATCAAACACTAAGAGTCACAAATGTAAGATGTTTTCCCCTGGTGAAGACCAAAGCACTGGATTGTCTCCGTCTGGAACAAGTTGCAACCACTGTAAAGTTTTAGTGGGACCACACGCTGCTGCATCTACTAGCAAAAGCAAGAAGATAGACAATCGTTGCTTGACAAGGAACAATTCATTTATTGATGTACGGAGCCAGATGCTACATCGTTCCCTAGTTGAGGAGGTAAGCAAGAGACGTTTGTTCAAGACAGTTGGAGCTGTGGAAAATATTGGATTTCAGAATCCTCTTGAGGCTCCCAGAAGAAAATCACAACCAGGGTTTGGTGGTGGTTTAGATGTGAAATCTTCAAGGAGTGGCAAAGGACAAACACTACGGAGTTATTCTTTGAACATCAGAAGTGAAAGAGATAGATGGCATAATTCTTTGTTATTGGGATAG 1926 0.4138 MYGSKEHKDDIKGDHGYVETDPSGRYGRFGEILGKGAMKTVYKAIDEVLGIEVAWNQVRLNEALRTPDDLQRLYSEVHLLSTLKHQCIIRFYTSWIDIENKTFNFITEMFTSGTLREYRKKYVRVGIQAIKSWARQILQGLVYLHDHDPPVIHRDLKCDNVFVNGHLGQVKIGDLGLAAILRGSHSAHSVIGTPEFMAPELYEEEYNELVDVYSFGMCVLEMLTSEYPYGECANPAQIYKKVTSGKLPAALFRIEDTEAQKFVRKCLVAAADRPSAKELLLDPFLSSNDASSNTKFEIQKPLLNDIEIEKLHLTDGSQRTGMKITGKLNPEDDTIFLKVQITDEDDSARNIYFPFDILTDTPIDVAMEMVRELEITDWEPFEISSMIEAEISALLPQRRKRDCSDTFHMFNYQNDDNNEPQYHFGSLSSCSSSLESVSGMVTKAEELPNGYYWLHDELIDDSSSRCSSQGTYSNLNYASADDQEQNVTSTRKDKPSNTKSHKCKMFSPGEDQSTGLSPSGTSCNHCKVLVGPHAAASTSKSKKIDNRCLTRNNSFIDVRSQMLHRSLVEEVSKRRLFKTVGAVENIGFQNPLEAPRRKSQPGFGGGLDVKSSRSGKGQTLRSYSLNIRSERDRWHNSLLLG 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1305 641 MobiDBLite consensus disorder prediction 591 622 - -
Alju08g1305 641 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1305 641 FunFam probable serine/threonine-protein kinase WNK9 110 290 - -
Alju08g1305 641 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Alju08g1305 641 SUPERFAMILY Protein kinase-like (PK-like) 29 286 IPR011009 -
Alju08g1305 641 CDD STKc_WNK 25 285 - -
Alju08g1305 641 FunFam Probable serine/threonine-protein kinase WNK1 12 108 - -
Alju08g1305 641 Gene3D Transferase(Phosphotransferase) domain 1 110 293 - -
Alju08g1305 641 MobiDBLite consensus disorder prediction 477 518 - -
Alju08g1305 641 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1305 641 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Alju08g1305 641 MobiDBLite consensus disorder prediction 486 506 - -
Alju08g1305 641 Gene3D - 319 403 - -
Alju08g1305 641 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1305 641 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 13 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1305 Alju-ChrAlju08 9851313 9855538 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1305 17 597 MAP Kinase Kinase Kinase AT5G58350 56.849 0.0 629
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Alju08g1305 Pkinase 2.1e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g1305 08 9851313 9855538 Alju08g1305 08 9851313 9855538 ECH