Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1303 ATGGGTAATCACAGGTTCAAATTGTCAGATATGATACCAAATGCTTGGTTTTACAAGCTCAAAGACATGAGCAGATCATCAAGGAAGCAGAAAGGTTCTCCTGCTACTGTGAAGAACAAAGCAAGCTCACCAGTGATGTCCCAGAGGTCGCCCCCAAATTGTTTGCATTATTTCCCCACAGAGCCTTGCAGAGCTGGTATGCTTTTTAACTCACCAATTCACACCAAAGTCACAGACTTTTCATTCACTGTTTCGCCAAGAAGGTCATCATCCAAGAGAAGAGCTCAGAGGAAAACCATTTACAAGCCTTCTCCCTCAGTTCTGTCCTCTGTCCCAACCGCTTGCAGCTGCCATTGGACTCCGCCAAATCAAGCCGAGTCCCCGGATTTCTATGCCTCTTCCATTGAGAGTTCTTCTTCTGAATTAGATCTCTATGAATGTATTACATCTGAGTCTGATGAGTGTGATAGCCCAGCAGCTCCTCACATGTTCAATATACTATCCCCTGATTGCAGTTGCAGGGTTAGTTCTTCCACTAATGATATCATCATAGACATGAACTCCGAATCATTTGTTGTGAATCCTGAAAAGCTAGATGGGTTTGATGCAATTTCAAAATTAGGCCTTCCTCCCATATTGACAAAACCAGTGAGGTTTGATGATCAGGCCATTGAAGCACCTTACTTGAAAGGTTCATCAAAGTTGGAGGAAAGCAGCAGAACTACAACTCCAAAGTCCTCTTCTAACTCAAGAGGAATAAGACTTAGAGTCAATTCAGCAAAACTTGCAAGTAGGAAAGTTCAAGTCTGTACAAGAAGGAGTGTATCATCATCATCATCAAGTGCATGCAAGGTTTCAAGGAAAACAGGGTTTCCAGAAGGTTTTGCGGTTGTCAAGTCCTCAATTGATCCACAAAGAGACTTCAAGGAATCAATGGTGGAGATGATCAGGGAGAAGAATATATGGTCATCAGAAGATTTGGAAGATCTTCTAGCTTGCTATCTCTCACTTAACTCGAGAGAATACCATGAACTCATAATCAAAGCATTTGAGCAGACTTGGTTTGACTTGGCTCAACTCAGAATGTAA 1089 0.4224 MGNHRFKLSDMIPNAWFYKLKDMSRSSRKQKGSPATVKNKASSPVMSQRSPPNCLHYFPTEPCRAGMLFNSPIHTKVTDFSFTVSPRRSSSKRRAQRKTIYKPSPSVLSSVPTACSCHWTPPNQAESPDFYASSIESSSSELDLYECITSESDECDSPAAPHMFNILSPDCSCRVSSSTNDIIIDMNSESFVVNPEKLDGFDAISKLGLPPILTKPVRFDDQAIEAPYLKGSSKLEESSRTTTPKSSSNSRGIRLRVNSAKLASRKVQVCTRRSVSSSSSSACKVSRKTGFPEGFAVVKSSIDPQRDFKESMVEMIREKNIWSSEDLEDLLACYLSLNSREYHELIIKAFEQTWFDLAQLRM 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1303 362 MobiDBLite consensus disorder prediction 29 50 - -
Alju08g1303 362 MobiDBLite consensus disorder prediction 230 251 - -
Alju08g1303 362 NCBIfam uncharacterized plant-specific domain TIGR01568 295 358 IPR006458 -
Alju08g1303 362 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 111 358 IPR038933 GO:0045892
Alju08g1303 362 MobiDBLite consensus disorder prediction 27 50 - -
Alju08g1303 362 ProSiteProfiles OVATE domain profile. 297 356 IPR006458 -
Alju08g1303 362 Pfam DNA-binding domain 1 43 IPR025830 GO:0003677
Alju08g1303 362 MobiDBLite consensus disorder prediction 234 251 - -
Alju08g1303 362 Pfam Transcriptional repressor, ovate 301 357 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1303 Alju-ChrAlju08 9848288 9849376 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Alju08g1303 Ovate 4.1e-24 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g1303 08 9848288 9849376 Alju07g0852 07 21551758 21552954 CCT
Alju08g1303 08 9848288 9849376 Alju08g1303 08 9848288 9849376 ECH