Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1300 ATGGATATTACTAGTCAAGGTCGAGGCCTTGGAAGTTCCACGAGTTTAACGAGTACCCAGCATCTTTCCATCCGCGTTAAGGAAAGTTTCTCACTTTCATCCTCTTTGGCCTCCCTTGCATTCCCAATCTGCAACGACCCGAAACTTCTGCGACTTTTGACCCTTTTTCGTTCCAGCGACGATAGAGACCTGAACCTGCTTCTTCGATCTGAGATCGAATGCGTGCCGGAGAATAACAACGCCTTGTTCGGCAAATATGAGCTCGGAAGGATTTTGGGCTGTGGGGCCTTCGCGAAAGTCTATTTTGCCCGCAATGTCCAGAACGGCCAGAGCGTGGCCATTAAGGTCATCAACAAGAAGAAGATATGTGGCACTGGCCTCATGTCTAATACCAAGCGTGAAATTACCATCATGAGTCGCCTCAATCACCCTAATATCGTCAAGCTCCACGAGGTCTTAGCCACCAAGACAAAGATCTATTTCGTCATGGAGTTCGTTAAGGGCGGCGAATTGTTTGCTAAGATCTCCAAGGGACGCTTCAGCGAGGACCTCAGCCGGAAGTATTTCCAACAGTTGATATCTGCGGTCGGCTACTGCCACTCCCGCGGCGTGTTCCACCGTGACTTGAAACCCGAGAACATCTTGCTCGACGAGAATGGGAATCTGAAGGTTTCGGACTTCGGACTCAGTGCCGTAAAAGATCAGATCCGACCCGATGGGTTGCTCCATACACTTTGTGGCACGCCGGCTTACGTCGCACCGGAGGTTTTGGCCAAGCAAGGCTACGATGGAGCGAAGGTGGATGTGTGGTCCTGTGGCGTTATCCTCTTCGTATTGACAGCTGGATACCTTCCGTTCAACGACCCGAACCTAATTGCCATGTACAAGAAGATATACAGAGGCGAATATCGGTGTCCCCGTTGGATGTCGCCCGACCTCCGGCGTTTTCTATCCCGGCTCCTGGACACCAACCCGGATACCCGAATCACCATCGACGAGATCCTCCGGGACCCGTGGTTCAGGAAAGGGTACAAGGAGGTTAAATTTCACGAGGAACACGTCGGGTCTTCATCAGGGACGAAGTCCGATGAGGCGGAGAAGATGATTGATCTGAATGCATTTGATATCATCTCGTTCTCCACCGGTTTGAACCTGTCTGGTTTGTTTGATGACCCACACAACAAAACAGATGAAACCGAGCGGTTCGTGTTGGCAGCATCACCGGAGAAGCTAGTGGACAGAGTGGAGGAGATCGCCAAGGTGGAGGAACTCGTCGTGAGGAGGAAGAAGGAATGTGGAGTGGAACTGGAGGGGCTTAATGGTAATTTTGGGGTTACTGTTGTTGTTTACCGGTTAATGGAAAGCCTCGTGTTAGTGGAGGCTCAAGGAAGAGGCAGAGATGGTATCAACTTCTGGAACAACAAGCTTAAGCCTCAGCTCTGTGCTGTTATAGGTCAAGAAACAGATTCCCAGGTTGCCGGTGACTAA 1488 0.5081 MDITSQGRGLGSSTSLTSTQHLSIRVKESFSLSSSLASLAFPICNDPKLLRLLTLFRSSDDRDLNLLLRSEIECVPENNNALFGKYELGRILGCGAFAKVYFARNVQNGQSVAIKVINKKKICGTGLMSNTKREITIMSRLNHPNIVKLHEVLATKTKIYFVMEFVKGGELFAKISKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENILLDENGNLKVSDFGLSAVKDQIRPDGLLHTLCGTPAYVAPEVLAKQGYDGAKVDVWSCGVILFVLTAGYLPFNDPNLIAMYKKIYRGEYRCPRWMSPDLRRFLSRLLDTNPDTRITIDEILRDPWFRKGYKEVKFHEEHVGSSSGTKSDEAEKMIDLNAFDIISFSTGLNLSGLFDDPHNKTDETERFVLAASPEKLVDRVEEIAKVEELVVRRKKECGVELEGLNGNFGVTVVVYRLMESLVLVEAQGRGRDGINFWNNKLKPQLCAVIGQETDSQVAGD 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1300 495 CDD CIPK_C 372 481 - -
Alju08g1300 495 ProSiteProfiles Protein kinase domain profile. 86 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1300 495 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 78 461 - -
Alju08g1300 495 FunFam Non-specific serine/threonine protein kinase 77 165 - -
Alju08g1300 495 FunFam Non-specific serine/threonine protein kinase 76 369 - -
Alju08g1300 495 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524
Alju08g1300 495 SUPERFAMILY Protein kinase-like (PK-like) 83 351 IPR011009 -
Alju08g1300 495 Gene3D Transferase(Phosphotransferase) domain 1 166 347 - -
Alju08g1300 495 Pfam Protein kinase domain 86 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1300 495 SMART serkin_6 86 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1300 495 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Alju08g1300 495 Gene3D Kinase associated domain 1, KA1 368 485 - -
Alju08g1300 495 Pfam NAF domain 371 427 IPR004041 GO:0007165
Alju08g1300 495 Gene3D Phosphorylase Kinase; domain 1 75 165 - -
Alju08g1300 495 ProSiteProfiles NAF domain profile. 366 390 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1300 Alju-ChrAlju08 9813707 9816141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1300 77 493 CBL-interacting serine-threonine protein kinases AT2G30360 65.882 0.0 574
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Alju08g1300 Pkinase 5.9e-73 CL0016