Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1294 ATGGAGGTAAGGGAAGGAAGTGTAGAGAGTGTGGTGGAGAATGGAGGAGGAGGAAGGCTCAGAGGCGGAGGAGACGAAGTGGAGAAATTGACATCTGATGGGAGTGCTGGGGTAGTTGAAGAAATATTACTTCCCCACCTGTTTGTGTTTGTGCCTCAAAGAAAGTCCTTCCTCCTTAAAGCTCCACTACACAGATCAAGACAACCAAGAGGCATGCTTGGATGTCCAGAAATAGAAAGAGCAGAAGAGATAGCGAAGAACACAGGAGAGGCGGTATCGCCAGAAGCGTCTAGCCAAATGGGAAGGAGAAATTTTTATGGACCAGCAGCTTCAGGGACAACCTTAAACACTGTAACTCCTTGTGCTGCATGTAAGCTTCTGAGAAGAAGATGTGCAGAGGAATGCTCTTTCTCTCCTTACTTTTCACCCCATGAGCCTCAGAAATTTTCTGCTGTTCATAAAGTGTTCGGTGCAAGCAATGTCTCCAAGATGCTAATGGAGGTGGCTGAGAGCCAAAGAGCAGATGCTGCAAACAGTCTGGTTTATGAAGCAAACCTGAGGCTGAGGGACCCAGTTTATGGAAGCATGGGTGCAATATCAGCTTTGCAGCAACAAGTTCAGACAATACAAGCAGAGTTAAATGCCGTGAGAGGTGAGATTCTCAAGTATAAGTATAGAGAAGCTGCTAGACAGATCATTTCTTCTCATCATCATCATGGTGGGGCTTTGGTTTCTTCTGTGGAGGAACCTCAACCACCTCCTCAACCTCCAAAACCACCTTCATTGGCTTCTTCTGCTTCTGTTGTTCTTTCATCCTTGTCTTCATCTTCCAGTTCTTCTCTATACACTCCCCCTAATAGCACAATTAGCCATGGATCTATCTCCAGCGAAAATGTCCCTTACTTTGTTTGA 912 0.4572 MEVREGSVESVVENGGGGRLRGGGDEVEKLTSDGSAGVVEEILLPHLFVFVPQRKSFLLKAPLHRSRQPRGMLGCPEIERAEEIAKNTGEAVSPEASSQMGRRNFYGPAASGTTLNTVTPCAACKLLRRRCAEECSFSPYFSPHEPQKFSAVHKVFGASNVSKMLMEVAESQRADAANSLVYEANLRLRDPVYGSMGAISALQQQVQTIQAELNAVRGEILKYKYREAARQIISSHHHHGGALVSSVEEPQPPPQPPKPPSLASSASVVLSSLSSSSSSSLYTPPNSTISHGSISSENVPYFV 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1294 303 ProSiteProfiles LOB domain profile. 119 220 IPR004883 -
Alju08g1294 303 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 116 258 - -
Alju08g1294 303 MobiDBLite consensus disorder prediction 262 297 - -
Alju08g1294 303 MobiDBLite consensus disorder prediction 1 32 - -
Alju08g1294 303 MobiDBLite consensus disorder prediction 239 303 - -
Alju08g1294 303 Coils Coil 199 219 - -
Alju08g1294 303 Pfam Lateral organ boundaries (LOB) domain 120 216 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1294 Alju-ChrAlju08 9772135 9776852 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1294 112 228 AS2 family AT2G30340 82.906 1.32e-68 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju08g1294 LOB 8.8e-39 No_clan