Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1291 ATGGAGAGGAGTCAGTGCGTTTTTGGGGAGTCAGAAGTCAGTCCTGGGGTTCCTAAAAATAGCATCTTTTTCGTTGCCTTTCGGTCGGGTGTTATGGAGATATCCTTGTTAAATGTGCTTGTCAATGGCATATCCTCATTTTTGCACCTCTCTTTTTCTGGGAATGGGAACTCAGAATTTGTTTCAAAGTATTACCAAAAGGTGGGGGAGACACTTAAGTTGCTCAAGCCTATAGCTGATGCTTTGGTTAATTCTGAATTAGCTTCTGATGAAGTGCTTAACAAGGCATTTGAAGAAGTGGGTCGGGCTGTTGATGAGTTGAGGGAGCTTTTTGGGAATTGGCACCCGTTGTCTAGCAAAGTTTACCTTGTTATGCGAGTTGAATCCTTGCTATCTAGGATTCAGACTTCAGCACTCAATATTTTCCAGCAGCTGAAGATTTCTCATATAAGTCTCCCAGACGAACTGAATACTGTACAAGTTGAGCATTGTGCTGAGAAACTTAAGCTTTTGGGACATGAGGAGGAAATCTCGTCAGTCATTAAAGAAGCTATTAGCGAACAAATGGAAGGTGCCGGACCTAGTTCAGAGGTCCTAGCAAACACTGCTGAGAGCCTGAGCCTGAGGTCTAACCAAGAGATTCTGATTGAGGCTGTAGCCCTTGAAAAGTTGAAGGAGATTGCTGAACAAGCTGAAAAAACTGCTGAAGCTGAGTATACTGATCAAATGATTACTCTTGTAACTCGCATGCATGAGCGTCTTGTTGCGCTTAAGCAAGCCCAGAGCAGCAGCCCAGTTGCAGTACCTCCTGATTTTTGCTGTCCTCTTTCTTTGGAGTTAATGATGGATCCAGTAATTGTGGCTTCAGGGCAAACATATGAGCGGGCTTTCATCAAGAACTGGATTGATTTGGGACTTACTGTCTGTCCAAAGACCCGTCAGTCCTTGGCTCACACCAACCTAATACCTAACTACACCGTAAAGGCGTTAATTGCAAACTGGTGTGAATCAAACAATGTGAAGCCAGTTGATCCCATAGTGTCCACAAACTTAAATCAAGCATCTTTTCTTCATGGGTACACGGAATCTGGTGCAACCAGGGAATCACCTGTTTTAGCTCATTCTAGGAGCAACCAACCATCCTCTCCGGAGGCAGTTCGCTCCCATTCTTTCAGTTCACCGAGTAAGAGCTTAACTTCTGGAGGAATCCACAGAGAGGGAACATCACCATTTCATCCTCGTTCAACTTCAGAAGGCTCCTTAAGCGGCATGGCTAATGGACAGTGTTTGGATGTTGCAAGAACATCACCTGCAGGTTCTGATGATAGGTCTGCTAGCTCAGATGAAAGGAGTGATGATTTAGTTGTCCAACCGTCAATGTCTCAATCTGTAACTGAATCTTCCAATGCCCATAGCTCTGAACAATCTCAAGGCCATGTTAGAGCAGCTTCTGATTCCAGTGCACTTTCCAGTGTTCAAGGAACACAAGGCAATGGCATAAGTACTCCTCAGCTGTCAGCCACTTCTGTCAACAGTAAGGATGGTTCTGTGGGGGTAAATTCTGGGATAGATGCTAATGGTGCTCCCCAGAGAGAACCTGAGATCTTACCCCGTGTGGAGACAAGGCCTCGAAACCAAAGTATGTGGCGGCGGCCATCAGAAAGATTTTTTCCTAGGGTGGTGCCCTCTGCTGGCGAAACAAGAGCTGATCTTTCTGGTATTGAAGTCCAGGTTAAGAGTTTGGTTGAGGACTTGAAGAGCACTTCTGTTGATACTCAAAGGGAGGCAACATCAAGGCTCCGCCTTCTTGCTAAGCACAATATGGATAATCGACTTGTGATTGCAAACTGTGGAGCCATTGAATTGTTGGTTGACTTCCTTAAATCAACTGATACGACAATCCAGGAAAATTCTGTGACAGCACTTCTGAACTTATCAATCAATGATAACAACAAAAGTGCAATTGCGAATGCCGGGGCAATTGATCCTCTAATCCATGTGCTTGAGACAGGAAGCCCCGAAGCGAAGGAGAATTCAGCTGCCACTCTCTTCAGCTTATCAGTGATTGAAGAAAACAAGATCAGGATAGGGAGGTCTGGGGCAATTGGGCCTCTGGTTGATTTATTAGGTAATGGAACTCCTAGAGGAAAGAAAGATGCTGCCACTGCTTTATTTAACTTGTCAATTTATCATGAAAACAAGGGCCGCATTGTGCATGCTGGAGCTGTGAAGCACCTTGTGGAATTAATGGATCCAGCAGCCGGTATGGTTGATAAGGCGGTGGCTGTTTTAGCAAACCTCGCAACAATTCAAGAAGGAAGAACCGCCATTGGCCAGGAAGGCGGGATATGTGTTTTAGTTGAGGTTGTCGAGTTGGGTTCTGCAAGAGGAAAGGAGAACGCAGCCGCGGCTCTACTACACCTTTGCTCAAACAATCCTCGATATTTGAGCACGGTGCTTCAAGAAGGAGCTGTCCCACCATTAGTAGCCTTGTCACAGTCAGGCACCCCAAGGGCTAAGGAAAAGGCGCAGGCTCTCCTCAACCAAATTAGAAGTCAAAGAAATGCTGGGAGAGGTTGA 2580 0.4554 MERSQCVFGESEVSPGVPKNSIFFVAFRSGVMEISLLNVLVNGISSFLHLSFSGNGNSEFVSKYYQKVGETLKLLKPIADALVNSELASDEVLNKAFEEVGRAVDELRELFGNWHPLSSKVYLVMRVESLLSRIQTSALNIFQQLKISHISLPDELNTVQVEHCAEKLKLLGHEEEISSVIKEAISEQMEGAGPSSEVLANTAESLSLRSNQEILIEAVALEKLKEIAEQAEKTAEAEYTDQMITLVTRMHERLVALKQAQSSSPVAVPPDFCCPLSLELMMDPVIVASGQTYERAFIKNWIDLGLTVCPKTRQSLAHTNLIPNYTVKALIANWCESNNVKPVDPIVSTNLNQASFLHGYTESGATRESPVLAHSRSNQPSSPEAVRSHSFSSPSKSLTSGGIHREGTSPFHPRSTSEGSLSGMANGQCLDVARTSPAGSDDRSASSDERSDDLVVQPSMSQSVTESSNAHSSEQSQGHVRAASDSSALSSVQGTQGNGISTPQLSATSVNSKDGSVGVNSGIDANGAPQREPEILPRVETRPRNQSMWRRPSERFFPRVVPSAGETRADLSGIEVQVKSLVEDLKSTSVDTQREATSRLRLLAKHNMDNRLVIANCGAIELLVDFLKSTDTTIQENSVTALLNLSINDNNKSAIANAGAIDPLIHVLETGSPEAKENSAATLFSLSVIEENKIRIGRSGAIGPLVDLLGNGTPRGKKDAATALFNLSIYHENKGRIVHAGAVKHLVELMDPAAGMVDKAVAVLANLATIQEGRTAIGQEGGICVLVEVVELGSARGKENAAAALLHLCSNNPRYLSTVLQEGAVPPLVALSQSGTPRAKEKAQALLNQIRSQRNAGRG 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1291 859 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 741 782 IPR000225 GO:0005515
Alju08g1291 859 SUPERFAMILY ARM repeat 578 850 IPR016024 -
Alju08g1291 859 ProSiteProfiles U-box domain profile. 267 341 IPR003613 GO:0004842|GO:0016567
Alju08g1291 859 Pfam Armadillo/beta-catenin-like repeat 691 728 IPR000225 GO:0005515
Alju08g1291 859 Pfam Armadillo/beta-catenin-like repeat 648 687 IPR000225 GO:0005515
Alju08g1291 859 Pfam Armadillo/beta-catenin-like repeat 609 646 IPR000225 GO:0005515
Alju08g1291 859 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 700 742 IPR000225 GO:0005515
Alju08g1291 859 PANTHER U BOX DOMAIN-CONTAINING 62 849 - -
Alju08g1291 859 MobiDBLite consensus disorder prediction 451 519 - -
Alju08g1291 859 SMART Ubox_2 271 334 IPR003613 GO:0004842|GO:0016567
Alju08g1291 859 FunFam RING-type E3 ubiquitin transferase 267 342 - -
Alju08g1291 859 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 618 660 IPR000225 GO:0005515
Alju08g1291 859 MobiDBLite consensus disorder prediction 367 547 - -
Alju08g1291 859 MobiDBLite consensus disorder prediction 367 424 - -
Alju08g1291 859 SUPERFAMILY RING/U-box 258 344 - -
Alju08g1291 859 SMART arm_5 607 647 IPR000225 GO:0005515
Alju08g1291 859 SMART arm_5 730 769 IPR000225 GO:0005515
Alju08g1291 859 SMART arm_5 770 810 IPR000225 GO:0005515
Alju08g1291 859 SMART arm_5 648 688 IPR000225 GO:0005515
Alju08g1291 859 SMART arm_5 689 729 IPR000225 GO:0005515
Alju08g1291 859 SMART arm_5 811 852 IPR000225 GO:0005515
Alju08g1291 859 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 248 344 IPR013083 -
Alju08g1291 859 FunFam RING-type E3 ubiquitin transferase 562 856 - -
Alju08g1291 859 CDD RING-Ubox_PUB 269 321 IPR045210 -
Alju08g1291 859 Pfam U-box domain 268 338 IPR003613 GO:0004842|GO:0016567
Alju08g1291 859 Coils Coil 218 241 - -
Alju08g1291 859 Gene3D - 566 856 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1291 Alju-ChrAlju08 9743891 9754493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1291 227 859 U-box Gene Family AT2G23140 60.340 0.0 696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g1291 08 9743891 9754493 Alju07g0844 07 20260692 20263959 CCT