Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1267 ATGGCATCTTCTTCAGGAAGCCTTGACACTTCTGCTAACTCTCACCCCACCACCTTCACTTTCTCTACGCATCCATTCATGAATACTTCCTTCTCTGAGCTTCTTGCTTCTCCCGTCGCCGCCGCCGATAACCCCGCCGCCGATAAACCGCGCGGATTGTCGGATCGTGTTGCAGAGAGAACCGGGTCGGGTGTGCCCAAATTCAAGTCGACCCCACCTCCTTCTCTGCCTCTCTCTCCTCCTGCCATTTCTCCTTCTTCTTACTTCTCCATCCCTGCTGGGTTGAGCCCTGCTGAGCTTCTTGACTCGCCTGTTCTCCTTAGTGCTTCTAACATTTTGCCATCTCCGACAACCGGAGCATTCTCTGCTCAGGCCTTCAATTGGAAGACCAGTTCTGGGCAAAACCTGCAAAACATCAAAGAAGAAGACAAGAACTTCTCAAGTTTCTCGTTTCAACCCCAATCCAGACCTCCTCTTCCATCCACCACAACGTTTCAAACCTCAGCTCCCTCTAATCAAACTCAACAGGCATGGAGTTTTCAAGAAGCCACGAAGCAAGACAACTTCTTTTCTTCAGGAAAGAATATGGTGAAAGCCGAGTACGCTTCTACACACAGCTATTCCACAGAGATGGTTATAAATAATGTCCAAGCAAACCATAATAGTGGGTTTCAATCAGATCATAACAATTACATTCCTCAGACCTTAAGCAGAAGATCTGATGATGGGTACAACTGGAGAAAGTATGGGCAAAAGCAAGTGAAAGGAAGTGAGAATCCTAGAAGCTATTATAAATGCACATACCCTAGTTGCCCAACAAAGAAGAAGGTTGAGAGGTCTTTGGATGGACAAATCACTGAGATAGTTTACAAGGGAACACATAACCACCCCAAGCCTCAGGCAACTAGGAGAAACTCATCAAATGCATCTTCTCTCCCAATTCCTGGTTCAAATTCTGTGACAGCTGAAATCCCAGATCAGTCATTTGCCAGTCATGGTAATGGACAAGTGGATTCAGCTGCAACACCAGAGAACTCATCCATATCGATGGGGGATGATGATTTTGAGCAGACTTCCCAGAGGACTAGATCAGGGGGAGATGAGTTTGATGAAGATGAATCTGATGCCAAAAGATGGAAAATGGAAGGTGAAAATGAGGGTATATCTGCAGCTGGAAGTAGAACAGTAAGGGAACCCAGAGTTGTAGTCCAGACAACCAGTGACATAGATATTCTAGATGATGGATACAGATGGAGAAAATACGGGCAAAAAGTGGTGAAGGGAAATCCAAATCCAAGGAGTTACTACAAATGCACACACCCAGGATGTCCAGTGAGGAAGCACGTAGAGCGAGCCTCACACGACCTAAGGGCAGTGATCACAACCTACGAAGGAAAACATAACCATGATGTGCCGGCGGCCAGAGGGAGTGGCGGCGGCCATTCGGTGAACAGACCTCTCTTAAACAATTCCACAAACACCAACAGTGCAATGACCACAGCCATAAGACCATCAGCCATCACACACAACACCAACAACAACTCAATTCAGAATTTTAGGGCAGCAGGAGAAAGTCAATCATCATCACTGGCCCTAGGGATGCTTCAGGGTCAAGGAAGCTTTGGTTTTTCAGGGTTTGGGAATGCAATGGGGTCCTTCATGAATCAAAATAACAACAACAACAACAACAATAATAATCAGCAGCAGCAAGCACAATCTGAGAACGAGTTTTCTTCGAGAGCCAAGGAGGAGCCGAGGGATGATGTGTTTTTTGAATCTCTACTGTGCTGA 1791 0.4634 MASSSGSLDTSANSHPTTFTFSTHPFMNTSFSELLASPVAAADNPAADKPRGLSDRVAERTGSGVPKFKSTPPPSLPLSPPAISPSSYFSIPAGLSPAELLDSPVLLSASNILPSPTTGAFSAQAFNWKTSSGQNLQNIKEEDKNFSSFSFQPQSRPPLPSTTTFQTSAPSNQTQQAWSFQEATKQDNFFSSGKNMVKAEYASTHSYSTEMVINNVQANHNSGFQSDHNNYIPQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPSCPTKKKVERSLDGQITEIVYKGTHNHPKPQATRRNSSNASSLPIPGSNSVTAEIPDQSFASHGNGQVDSAATPENSSISMGDDDFEQTSQRTRSGGDEFDEDESDAKRWKMEGENEGISAAGSRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGGGHSVNRPLLNNSTNTNSAMTTAIRPSAITHNTNNNSIQNFRAAGESQSSSLALGMLQGQGSFGFSGFGNAMGSFMNQNNNNNNNNNNQQQQAQSENEFSSRAKEEPRDDVFFESLLC 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1267 596 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 101 557 IPR044810 GO:0003700
Alju08g1267 596 MobiDBLite consensus disorder prediction 290 393 - -
Alju08g1267 596 MobiDBLite consensus disorder prediction 552 576 - -
Alju08g1267 596 Gene3D WRKY domain 399 465 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju08g1267 596 Gene3D WRKY domain 230 300 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju08g1267 596 SUPERFAMILY WRKY DNA-binding domain 239 299 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju08g1267 596 MobiDBLite consensus disorder prediction 356 384 - -
Alju08g1267 596 SMART WRKY_cls 240 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju08g1267 596 SMART WRKY_cls 412 471 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju08g1267 596 MobiDBLite consensus disorder prediction 552 587 - -
Alju08g1267 596 Coils Coil 554 574 - -
Alju08g1267 596 MobiDBLite consensus disorder prediction 146 174 - -
Alju08g1267 596 MobiDBLite consensus disorder prediction 42 79 - -
Alju08g1267 596 FunFam WRKY transcription factor 228 300 - -
Alju08g1267 596 ProSiteProfiles WRKY domain profile. 241 299 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju08g1267 596 ProSiteProfiles WRKY domain profile. 407 472 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju08g1267 596 MobiDBLite consensus disorder prediction 299 355 - -
Alju08g1267 596 FunFam WRKY transcription factor 33 399 465 - -
Alju08g1267 596 Pfam WRKY DNA -binding domain 413 469 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju08g1267 596 Pfam WRKY DNA -binding domain 241 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju08g1267 596 SUPERFAMILY WRKY DNA-binding domain 404 472 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1267 Alju-ChrAlju08 9548026 9550608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1267 65 512 WRKY Transcription Factor Family AT2G38470 49.123 1.19e-111 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju08g1267 WRKY 1.7e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju08g1267 08 9548026 9550608 Alju08g1267 08 9548026 9550608 ECH