Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1242 ATGGAATACAATTCAGTACTCCGAAGCCCAAAGAAAGAGGAGCAGCAAGTCCCCGACGCTACACCTTATTCCAAGGATGATTTTAATATCTTGGATGAACTGGGCGACGGCGTTTTAGGCTCTGAACAAGACCACTCAGAATTACAACATCACTGTTATGGTGGTCACCTTAATTGGGACTTCATGGGATTGGAAGGTTTCTCAACTGTTGATGCAGAGGAAGCAGAAGTAGCAACCGACGATGAAGGCGAAGAACAGGAGGAGAAGGAGGAGAGAAGCAAATGCCGACTTGTGGAAAAGGACAAGATTATAAAGACAGAAAATCATGGTGGATGTCTCTGGGACGAAGACGATGATGATGAGAAGATGGTGTCTTTGAGATTGAACTTGAACTATCAAGAGGTGTTGGACGCATGGTCTGACCGTGGCTCTCTCTGGGCCCACGATTGTTCTCTTTCAATGCCTTCCAACGCTAATGACGCATTTTTCTATATGGGAAAAGTTCCAATAAGGCAGGAGGAAGATAGAAGCAGAAGGAATGCGAGTGTTAGAAGGTACAAAGAGAAGCGTCAGAGCAGACTCTTCTCCAAGAAGATAAGATACCAAGTCCGAAAACTCAATGCTGATAAAAGACCTCGACTCAAGGGTCGTTTTGTGAAGAAGAGACTTTAG 672 0.4479 MEYNSVLRSPKKEEQQVPDATPYSKDDFNILDELGDGVLGSEQDHSELQHHCYGGHLNWDFMGLEGFSTVDAEEAEVATDDEGEEQEEKEERSKCRLVEKDKIIKTENHGGCLWDEDDDDEKMVSLRLNLNYQEVLDAWSDRGSLWAHDCSLSMPSNANDAFFYMGKVPIRQEEDRSRRNASVRRYKEKRQSRLFSKKIRYQVRKLNADKRPRLKGRFVKKRL 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1242 223 Pfam CCT motif 179 221 IPR010402 GO:0005515
Alju08g1242 223 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 36 221 - -
Alju08g1242 223 MobiDBLite consensus disorder prediction 1 20 - -
Alju08g1242 223 MobiDBLite consensus disorder prediction 1 28 - -
Alju08g1242 223 ProSiteProfiles CCT domain profile. 179 221 IPR010402 GO:0005515
Alju08g1242 223 MobiDBLite consensus disorder prediction 74 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1242 Alju-ChrAlju08 9391048 9391963 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1242 99 221 C2C2-CO-like Transcription Factor Family AT1G25440 38.406 3.33e-20 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju08g1242 CCT 1e-17 CL0281