Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1237 ATGGATGTGGTATCCATTCCAAAAACGAACGAGAACATCAGACTCCTCTATGATGTCAAGGGTCGTTTTCGGCTGCGATCAATAACAGAGCACGAGGCAAAGTTCAAGCTGTGTAAGTTTGAAGTTGGAAATGTGGCGATGGTGACGGGTGGAAGGAACGGAGGACGAGTTGGGATCATAAAGAGGAGGGAAAAACATATGGGCACCTTCGACACCATCCATGTCCAGGATGCTGCTGGAAACGAGTTCGCTACTCGTTTGGAAAACGTTTTCATTATTGGTCTGGGCTCAAAACCATGGGTCACTTTACCCAAGGGAAAGGGAGTTAAGCTGAGTATCATTGAAGAAGCCAGGCTCAGGCGTGAGGCAGAAAGGGCTTCTGCAGCATGA 390 0.4821 MDVVSIPKTNENIRLLYDVKGRFRLRSITEHEAKFKLCKFEVGNVAMVTGGRNGGRVGIIKRREKHMGTFDTIHVQDAAGNEFATRLENVFIIGLGSKPWVTLPKGKGVKLSIIEEARLRREAERASAA 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1237 129 Pfam Ribosomal family S4e 9 52 IPR013845 -
Alju08g1237 129 Pfam 40S ribosomal protein S4 C-terminus 77 123 IPR032277 -
Alju08g1237 129 CDD KOW_RPS4 40 94 IPR041982 -
Alju08g1237 129 Gene3D - 40 110 IPR014722 -
Alju08g1237 129 PANTHER 30S/40S RIBOSOMAL PROTEIN S4 1 40 IPR000876 GO:0003735|GO:0005840|GO:0006412
Alju08g1237 129 Gene3D - 1 31 IPR036986 GO:0003723
Alju08g1237 129 FunFam 40S ribosomal protein S4 40 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1237 Alju-ChrAlju08 9352142 9352859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1237 1 127 Cytoplasmic Ribosomal Protein Gene Family AT5G07090 53.409 1.76e-58 179