Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1225 ATGGAAGCAGGTTTGGTTGTGTTGATGCTGATGCTGATGAGTTTGTTTGCTTCGAGTTTTAGCTTCTCTTCTTTTTCGCCTCTCAACAGTGAAGGTATGGCGCTGTTAATGTTTAAGAACAGAGTGGTGAGAGACCCATTTGGAGCTTTGTCCAATTGGAATACTGAAGGTGGATATACTGATCCCTGTTCATGGTTTGGAGTTCAATGCTCTGTTCACGGCAAAGTCGTTTCCTTGAATTTGAAGGACCTTTGTCTTGAAGGAACGCTAGCCCCTGAAATTGGGAGGCTGACTCACATAAAATCTATCATTTTGCGCAACAATTCTCTTTCTGGAGAGATCCCTAAAGAGATATCACAACTGGAGGAACTGGAAGTTCTTGACTTGGCATATAACAACTTTAAAGGATCATTTTCTTCTCACACTTCCAGAAATCCATCCCTCACCACCCTGCACATAGGCCACCATGAGGATGAGCCATACAAGAGGAAACTTCTTCATAGATCAAAAGCAAGGAGAAAAAGAGATCATAAGAAAGAGTCTGTTTCACCCTCAGCCTCCCCTTCTCTTTCTTCATTACCACCAGATCATGAGTCTTTCTTACCATCAGAACCACCATCTGAATTAACCCCATCACCATATATGCTACCACCTTTTGGTTCCCCTGAAGTTTCTCCTTTACCATCGCCGTCCTCTATTTTTCTCACGCCTTCAATATCACCAATAGCGACACCAACCGAAGGAATATCGGTACCAGCAAATCCACCTACTGTTGTGTCCTCTCCTTCACAGTCCAATTGGATTTCAGCACCTTCCCCTGCTTCATTTTGGAACCAAGGGAGCACAAAAAGTTCTAAGCCCCAGAAATCTTTGATCATTTGGTCAACAGCTGGGGGTGTATCCTTACTGGTTGTTGTGTCAGCAATTGTTTTTTCTTGCTTCCGAACTAGCAGGGTTGTTACTGTGAAACCTTGGTCCACTGGGTTAAGTGGGCAGCTACAGAAAGCTTTTGTCACAGGTGTGCCAAATCTCAGACGAGGAGAGATTGAAGCAGCTTGTGAAGATTTCAGCAACATTATTGGTTCTATTCCGGAGGGGTCTGTTTATAAGGGCACTCTTTCCAGTGGTGTTGAGATTGCTGTAGTTTCAACCGCAGTGAAATCATCTAAATACTGGCCTAAAACTATGGAAGCTCAATTTAGGAGAAAGATAGAGACCTTATCCAGAGTGAACCACAAGAACTTTGTCAATCTTATTGGGTATTGTGAGGAGAAGAAACCATTCACAAGAATGATGGTCTTTGAGTATGCCCCAAACGGAACTCTCTTTGAACATCTACATATAAGAGAAGCAGAGCAGCTAGATTGGGGAATGAAAATGAGGATAGCTATGGGAATAGCTTATTGTCTAGAGCATATGCATCAGCTGGAACCACCCATTGCCCTCAGAAACCTTCAGTCTTCATCTATATACCTCACTGAAGATAATGCAGCTCAAGTATCAGACCTTTGTTTCTGGAATGACATGGCTGCTGCTACAAAGAAAAGGTCTGCGGCCGCAATGCCATCAGAAACACCATCAACAGATACAAAGGAAAATGTATATAGCTATGGGGTTATACTGTTTGAGTTGATCACAGGGAGAATTCCCCACCCTGTGGAAATTGGCTTTATTTCACAGTACTTAACAATGGGGCAATCTTTGAGAGATATGGTGGATCCAACTCTGAACTCTGTGCAAGCAGAAGAAGCTGGAAAAATGTGGGAATTGATAAAACAGTGTTTGTATCCAGAACCAGAGAAAAGGCCAACTATGAGAGAAGTTGCAGCTAAGTTGAAGGACATAACTGGAATGGGACCTGATGGAGCAACTCCAAAATCTTCACCTCTTTGGTGGGCAGAACTGGAAATTTTGTCCACAGATTCTGCCTGA 1932 0.4306 MEAGLVVLMLMLMSLFASSFSFSSFSPLNSEGMALLMFKNRVVRDPFGALSNWNTEGGYTDPCSWFGVQCSVHGKVVSLNLKDLCLEGTLAPEIGRLTHIKSIILRNNSLSGEIPKEISQLEELEVLDLAYNNFKGSFSSHTSRNPSLTTLHIGHHEDEPYKRKLLHRSKARRKRDHKKESVSPSASPSLSSLPPDHESFLPSEPPSELTPSPYMLPPFGSPEVSPLPSPSSIFLTPSISPIATPTEGISVPANPPTVVSSPSQSNWISAPSPASFWNQGSTKSSKPQKSLIIWSTAGGVSLLVVVSAIVFSCFRTSRVVTVKPWSTGLSGQLQKAFVTGVPNLRRGEIEAACEDFSNIIGSIPEGSVYKGTLSSGVEIAVVSTAVKSSKYWPKTMEAQFRRKIETLSRVNHKNFVNLIGYCEEKKPFTRMMVFEYAPNGTLFEHLHIREAEQLDWGMKMRIAMGIAYCLEHMHQLEPPIALRNLQSSSIYLTEDNAAQVSDLCFWNDMAAATKKRSAAAMPSETPSTDTKENVYSYGVILFELITGRIPHPVEIGFISQYLTMGQSLRDMVDPTLNSVQAEEAGKMWELIKQCLYPEPEKRPTMREVAAKLKDITGMGPDGATPKSSPLWWAELEILSTDSA 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1225 643 ProSiteProfiles Protein kinase domain profile. 354 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1225 643 FunFam Leucine-rich repeat receptor-like kinase 30 155 - -
Alju08g1225 643 Pfam Leucine rich repeat N-terminal domain 29 71 IPR013210 -
Alju08g1225 643 SUPERFAMILY L domain-like 31 155 - -
Alju08g1225 643 PANTHER PROTEIN MALE DISCOVERER 2 9 640 - -
Alju08g1225 643 MobiDBLite consensus disorder prediction 139 223 - -
Alju08g1225 643 SUPERFAMILY Protein kinase-like (PK-like) 338 611 IPR011009 -
Alju08g1225 643 MobiDBLite consensus disorder prediction 206 223 - -
Alju08g1225 643 Gene3D Phosphorylase Kinase; domain 1 330 436 - -
Alju08g1225 643 Gene3D Transferase(Phosphotransferase) domain 1 438 618 - -
Alju08g1225 643 Gene3D Ribonuclease Inhibitor 27 172 IPR032675 -
Alju08g1225 643 MobiDBLite consensus disorder prediction 151 165 - -
Alju08g1225 643 FunFam Inactive receptor-like serine/threonine-protein kinase 328 436 - -
Alju08g1225 643 Pfam Protein tyrosine and serine/threonine kinase 358 612 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1225 Alju-ChrAlju08 9238294 9241739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1225 5 547 Receptor kinase-like Gene Family AT2G23950 28.722 6.40e-44 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Alju08g1225 PK_Tyr_Ser-Thr 1.5e-26 CL0016