Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1223 ATGGCAAGCTTGAGGAAGATTGGAACTTCTTCTTCAGCCAAATTAGAGGAACCATCCACTAAATTGAGTCTAGGGATGATAGGTTCTTCGTTTCAATCAAAGATGGTGACTGTTGTTGATGATCATCGTGAGAAGAAGAAAATGTCCATGAATAATGATAATCCTGTCCCCCATATTGACTTGACTCTCGACGACGACGACGACGATGATCTCCCGGTGGAGAAGAAAGTGATCGAAGTTAGCGGCGGCTCAAGTTCTCATGGTGGTGAAGGCCGCCCAGCAATTCCATTGGCTCCAAACCCTAGGCGATCAGTTCAAGAAATAATAGAGCGAAGGAGGATCAACCGACTTTCTGCAAAGAGATCGAGAGCGAGGAAGAATGAGTACGTGGCTGAGATGGAGAGACAGGCAAAATATCTGGAGAATAAGATAGCCATGCTTCACCCACAAGTTATGGCTTTTCAGCATCAGCGTTGCTTATTGCTGATTGAGCAGAACGAGATGAAATTTCGAATGGCTTTGGTTCAACATGACAGGCTTCTTAAAGAAAGGCAAACGGAGAAGATGAAAGAAGAAATAATGAGGCTTCTAGAAATTAAGAAGCGTCAAGAGCAAATTCGAGCTGAAGAGATGAAAACTTGGGGTGCTGATATTTCGTTAATGTGCCCCAACCCAAACCCTTCAGGTCCATCCAAACCACTGGATATTGCCTCAACTTCATCACCCTTTAAAGAGATGGAGGCTGATGAAACTGCCAACAATCTCATAAACAAAGGCGAAGGGAAGGCAAAGGCTTATTAA 801 0.4407 MASLRKIGTSSSAKLEEPSTKLSLGMIGSSFQSKMVTVVDDHREKKKMSMNNDNPVPHIDLTLDDDDDDDLPVEKKVIEVSGGSSSHGGEGRPAIPLAPNPRRSVQEIIERRRINRLSAKRSRARKNEYVAEMERQAKYLENKIAMLHPQVMAFQHQRCLLLIEQNEMKFRMALVQHDRLLKERQTEKMKEEIMRLLEIKKRQEQIRAEEMKTWGADISLMCPNPNPSGPSKPLDIASTSSPFKEMEADETANNLINKGEGKAKAY 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1223 266 Coils Coil 123 143 - -
Alju08g1223 266 Gene3D - 109 159 - -
Alju08g1223 266 MobiDBLite consensus disorder prediction 1 20 - -
Alju08g1223 266 MobiDBLite consensus disorder prediction 47 68 - -
Alju08g1223 266 PANTHER BASIC LEUCINE ZIPPER 34 79 216 - -
Alju08g1223 266 Pfam Basic region leucine zipper 109 152 IPR004827 GO:0003700|GO:0006355
Alju08g1223 266 SUPERFAMILY Leucine zipper domain 110 159 IPR046347 GO:0003700|GO:0006355
Alju08g1223 266 MobiDBLite consensus disorder prediction 244 266 - -
Alju08g1223 266 MobiDBLite consensus disorder prediction 80 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1223 Alju-ChrAlju08 9229494 9231545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1223 78 183 bZIP Transcription Factor Family AT2G42380 33.019 6.66e-13 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Alju08g1223 bZIP_2 2.4e-08 CL0018