Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1208 ATGGCATCAACGGCTAGTTTTTTGTGTTTCTTCCTTGCGTTGGCCTCCTTCTTGTGTTGTGTGGACTCGTTGTCGGAAATCGAAGCCCTAACGGCTTTCAGGCTTAGTCTCCACGACCCACTCGGCTCCTTGGACGCCTGGGATCCCTCCACGCCTTCCGCTCCTTGTGATTGGCCTGGCATTTTCTGTTACCACAACCGAGTTAACGAGCTTCGCTTGCCTCGCCTTCAACTCGCCGGTCGGCTCTCCGATTCCGTCTCTAGCTTGCGTCAACTTCGCAAGCTGAGCCTTCATTCTAACAACTTCAATGGCTCCATTCCTCCTTCTCTCTCTCAATGCCTGCTTCTGCGTTCTGTTTATCTTCATAATAACTCTTTTTCTGGTAAACTCCCGGCGGCTCTTCTCAACCTTACCAACCTTCAAATCTTCAACGCTGCTCACAACTTTCTTTCTGGCCGAATCCCCGGAGATTTATCGAACTCTCTCCGGTTCCTTGATTTATCGTCGAATGCATTTTCCGGTGATATTCCGGCTAATTTTTCGTCAAAGTCTCAGCTACGACTCATCAACTTGTCCTACAATCGGTTCTCTGGAAGAATACCGGGCACTGTTGGAGTTCTGGGGAAGCTTGAGTATCTTTGGCTGGACTCCAACCAGTTGTATGGGACTCTGCCTTCTGCTCTAGTTAACTGCTCTTCTCTTGTGCATCTAAGCGCCGTAAACAATTCGCTTTCCGGTTTGATTCCGGCGACCATGGGGACGATGCCGAGGCTTCAAGTGCTGTCGTTGTCGTCGAATCAGCTATCTGGACTGGTCCCCACTTCTCTGTTTTGCAATGTCCACTTGGCCAATTCTTCTTCGCTGAGAATCGTTCAATTAGGCTTCAATAAACTCACGGGCATTTCCGAGCCGCCAAATGCAAGGTGTGTTAATGTTTTGGAGGTTTTAGAGATTAACGAGAATCGTATTCGCACCACATTTCCCTCCTGGTTGGCTCATGCGACATCGTTAAGAGCTGTTGATTTTTCCGGGAACTACTTTTCTGGTATTTTGCCTGCGGAGATTGGGAATTTATTGAGGCTAGAGGAGCTGAGAGTGGCAAATAATTCATTATCTGGTGATGTTCCTCATGAAATTGTGAAATGTACTTTGTTACAGGTTCTTGATCTTCAAGGAAACCGATTCTCCGGCCTCATTCCTTCATTTCTTGGTCAACTGAGGAACCTCAAAATGCTATCTCTTGGCCACAACCTCTTTACTGGTCCTATGCCCTCGAGTTTGGGAACACTTTCTGAGCTCGAGTCGTTGAATTTGAGCAATAATAAACTTACCGGGTTTGTACCCTCAGAATTAATGCGATTGGTTAACATGAGTGCTTTGAATCTCAGTAATAACAAATTTTCAGGCCAACTTTCGTCTGCCATTGGGGACTTAATAGCTTTACAGGTTCTGAATTTGAGTCATTGTGGGTTTTCAGGACAGATTCCTGCTAGTGTTGGCGGTTTAATGAAACTGACGGTGCTGGATTTAAGTAGACAAAATCTTTCAGGCGACTTGCCAATCGAGCTTTTTGGATTACCTAGCCTGCAGGTTGTTGCTCTTCAAGAGAACCATTTATCTGGAGCTGTTCCAGAGGGTTTCAGCAGTGTAGTTACTCTACAATATCTTAATATCAGCTCCAATGTCTTTGCTGGGGAAATTCCAGCTACTTATGGATTTCTTCTGTCGTTAATTGTTTTTTCTGCGTCTCAGAATCATATTTCTGGTAGAATACCATCAGAGATTGGTAACTGTTCTCAGCTTGAAGTGCTCGAGCTTCGTTCAAATCGTTTGCATGCTGACATTCCTGGCTATATCGACCGTCTTAATCGTTTAAGGGTCCTTGATTTGGGAGACAACAAGTTAACAGGAGATATTCCAGAAGAAGTTTCCGAATGTTCTGCTTTGAGTTCACTCCTCTTGGATGCTAATCAACTAACGGGTCGAATACCAGAATCCCTGTCAAGTTTATCAAACCTGACTGCGTTAGATCTCTCCTCAAATCAGCTGAGCGGAGACATCCCGGCCAGCCTGTCACTCATATCTGGTTTGAAGTATTTAAATGTCTCTAGAAATAATCTTGAGGGTGAGATTCCAGAAAAGCTGGGCTCCCGGTTCAATGATCCTTCTATATATGCAATGAATAACAGGTTATGCGGAAAGCCACTGCATAGAGAATGTGCTAATGTAAGAAATCGAAAGAGGAAGAGGCTAATAATATTTATAGGCGTGGCTCTTGGTGGATTATGCCTTCTGGGGCTATGCTGCTGTGGCTACATTTATAGCCTTTTACGGTGGCGCAAGAAGCTAAGAGAAGGAGTAACAGGGGAGAAGAAAAAGAAGAGCCCTGCTCGTTCAAGTTCAGGAGCAGACAGAGGTCGAGGAAGTGGGGAAAATGGAGGGCCAAAACTAGTAATGTTCAATAACAAGATCACTTATGCAGAGACACTGGAAGCAACTAGGCAATTTGATGAAGAGAATGTATTGAGCAGAGGAAGATACGGTCTTGTGTTCAAAGCCTCGTACCCAGATGGAATGATGCTCTCAATCCGTCGTCTTCCTGATGGATCCACAGAGGAAGGAAGCTTCCGTAAAGAAGCAGAATCATTAGGAAGAGTGAAGCACCGTAATTTAACAGTATTGCGTGGCTATTATGCAGGCCCACCTGATGTGAGGCTTCTTGTCTATGACTACATGCCAAATGGAAACCTTGGAACTCTTCTTCAAGAAGCATCTCAGCAAGACGGCCATGTACTGAATTGGCCTATGCGTCATCTCATCGCATTAGGCATTGCTCGCGGACTAGCCTTCCTACATTCAGTCTCAATAGTTCATGGCGATGTGAAACCTCAAAATGTTCTGTTTGATGCTGACTTTGAAGCCCATTTATCAGAATTTGGCTTAGACAGAATAACAATCGCAACCCCAGCAGAAGCATCGTCATCATCCACTCCCGTAGGATCATTGGGGTACGTGTCGCCAGAAGCAGCATTAACTGGGCAAGCGACCAAAGAAGCCGACGTGTACAGCTTTGGGATTGTATTGCTGGAGATACTGACGGGAAGAAAACCGGTGATGTTCACGCAAGATGAAGACATAGTGAAATGGGTGAAAAGGCAATTGCAAAGAGGTCAGATATCGGAATTGCTTGAGCCTGGGTTGCTAGAGCTAGACCCAGAGTCATCGGAATGGGAAGAGTTCTTGTTGGGGATCAAAGTGGCTCTTCTATGCACAGCACCGGATCCTCTTGATCGGCCGTCAATGACTGACATTGTTTTCATGCTTGAAGGTTGCCGGGTGGGACCGGAGATTCCATCGTCGGCCGATCCCACCACGGTACCTTCCCCTACTTGA 3393 0.4589 MASTASFLCFFLALASFLCCVDSLSEIEALTAFRLSLHDPLGSLDAWDPSTPSAPCDWPGIFCYHNRVNELRLPRLQLAGRLSDSVSSLRQLRKLSLHSNNFNGSIPPSLSQCLLLRSVYLHNNSFSGKLPAALLNLTNLQIFNAAHNFLSGRIPGDLSNSLRFLDLSSNAFSGDIPANFSSKSQLRLINLSYNRFSGRIPGTVGVLGKLEYLWLDSNQLYGTLPSALVNCSSLVHLSAVNNSLSGLIPATMGTMPRLQVLSLSSNQLSGLVPTSLFCNVHLANSSSLRIVQLGFNKLTGISEPPNARCVNVLEVLEINENRIRTTFPSWLAHATSLRAVDFSGNYFSGILPAEIGNLLRLEELRVANNSLSGDVPHEIVKCTLLQVLDLQGNRFSGLIPSFLGQLRNLKMLSLGHNLFTGPMPSSLGTLSELESLNLSNNKLTGFVPSELMRLVNMSALNLSNNKFSGQLSSAIGDLIALQVLNLSHCGFSGQIPASVGGLMKLTVLDLSRQNLSGDLPIELFGLPSLQVVALQENHLSGAVPEGFSSVVTLQYLNISSNVFAGEIPATYGFLLSLIVFSASQNHISGRIPSEIGNCSQLEVLELRSNRLHADIPGYIDRLNRLRVLDLGDNKLTGDIPEEVSECSALSSLLLDANQLTGRIPESLSSLSNLTALDLSSNQLSGDIPASLSLISGLKYLNVSRNNLEGEIPEKLGSRFNDPSIYAMNNRLCGKPLHRECANVRNRKRKRLIIFIGVALGGLCLLGLCCCGYIYSLLRWRKKLREGVTGEKKKKSPARSSSGADRGRGSGENGGPKLVMFNNKITYAETLEATRQFDEENVLSRGRYGLVFKASYPDGMMLSIRRLPDGSTEEGSFRKEAESLGRVKHRNLTVLRGYYAGPPDVRLLVYDYMPNGNLGTLLQEASQQDGHVLNWPMRHLIALGIARGLAFLHSVSIVHGDVKPQNVLFDADFEAHLSEFGLDRITIATPAEASSSSTPVGSLGYVSPEAALTGQATKEADVYSFGIVLLEILTGRKPVMFTQDEDIVKWVKRQLQRGQISELLEPGLLELDPESSEWEEFLLGIKVALLCTAPDPLDRPSMTDIVFMLEGCRVGPEIPSSADPTTVPSPT 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1208 1130 PRINTS Leucine-rich repeat signature 433 446 - -
Alju08g1208 1130 PRINTS Leucine-rich repeat signature 670 683 - -
Alju08g1208 1130 SMART LRR_typ_2 207 231 IPR003591 -
Alju08g1208 1130 SMART LRR_typ_2 358 382 IPR003591 -
Alju08g1208 1130 SMART LRR_typ_2 89 113 IPR003591 -
Alju08g1208 1130 SMART LRR_typ_2 406 429 IPR003591 -
Alju08g1208 1130 SMART LRR_typ_2 478 502 IPR003591 -
Alju08g1208 1130 SMART LRR_typ_2 670 693 IPR003591 -
Alju08g1208 1130 SMART LRR_typ_2 255 278 IPR003591 -
Alju08g1208 1130 SMART LRR_typ_2 430 454 IPR003591 -
Alju08g1208 1130 SMART LRR_typ_2 622 646 IPR003591 -
Alju08g1208 1130 SMART LRR_typ_2 526 549 IPR003591 -
Alju08g1208 1130 SMART LRR_typ_2 694 718 IPR003591 -
Alju08g1208 1130 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Alju08g1208 1130 ProSiteProfiles Leucine-rich repeat profile. 432 453 IPR001611 GO:0005515
Alju08g1208 1130 ProSitePatterns Serine/Threonine protein kinases active-site signature. 956 968 IPR008271 GO:0004672|GO:0006468
Alju08g1208 1130 Gene3D Transferase(Phosphotransferase) domain 1 912 1116 - -
Alju08g1208 1130 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 450 744 - -
Alju08g1208 1130 Gene3D Ribonuclease Inhibitor 279 374 IPR032675 -
Alju08g1208 1130 SUPERFAMILY L domain-like 282 611 - -
Alju08g1208 1130 SUPERFAMILY Protein kinase-like (PK-like) 815 1120 IPR011009 -
Alju08g1208 1130 FunFam Putative LRR receptor-like serine/threonine-protein kinase 799 911 - -
Alju08g1208 1130 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 912 1116 - -
Alju08g1208 1130 Gene3D Phosphorylase Kinase; domain 1 812 911 - -
Alju08g1208 1130 Pfam Leucine rich repeat 504 561 IPR001611 GO:0005515
Alju08g1208 1130 Pfam Leucine rich repeat 600 659 IPR001611 GO:0005515
Alju08g1208 1130 Pfam Leucine rich repeat 385 443 IPR001611 GO:0005515
Alju08g1208 1130 Gene3D Ribonuclease Inhibitor 375 464 IPR032675 -
Alju08g1208 1130 Gene3D Ribonuclease Inhibitor 25 179 IPR032675 -
Alju08g1208 1130 SMART serkin_6 836 1107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1208 1130 Gene3D Ribonuclease Inhibitor 180 278 IPR032675 -
Alju08g1208 1130 ProSiteProfiles Leucine-rich repeat profile. 672 694 IPR001611 GO:0005515
Alju08g1208 1130 Gene3D Ribonuclease Inhibitor 465 749 IPR032675 -
Alju08g1208 1130 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 451 572 IPR046959 -
Alju08g1208 1130 Pfam Protein kinase domain 838 1105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1208 1130 FunFam Leucine-rich repeat receptor protein kinase EMS1 200 304 - -
Alju08g1208 1130 SUPERFAMILY L domain-like 552 733 - -
Alju08g1208 1130 MobiDBLite consensus disorder prediction 788 816 - -
Alju08g1208 1130 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 23 182 - -
Alju08g1208 1130 ProSiteProfiles Protein kinase domain profile. 836 1117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju08g1208 1130 SUPERFAMILY L domain-like 23 302 - -
Alju08g1208 1130 FunFam Piriformospora indica-insensitive protein 2 351 445 - -
Alju08g1208 1130 Pfam Leucine Rich repeat 671 686 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1208 Alju-ChrAlju08 9096187 9099579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1208 1 1129 Receptor kinase-like Gene Family AT1G75640 64.789 0.0 1378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Alju08g1208 Pkinase 2.7e-32 CL0016