Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1203 ATGACTGATGGAGGATGTTTCCCGACGATGGATCTGCTACGTTCGGAGCCAATGCAGCTGGTTCAGCTCATCATTCCGACCGAATCGGCTTACCGAGCCGTCTCTTACCTTGGAGATCTCGGCTTCTTTCAATTTAAAGATCTTAATGCAGAAAAAAGCCCATTCCAACGGACATATGCTGCTCAGATTAAAAGATGTGGGGAAATGACACGCAAGCTTCGGTTCTTTAAGGAACAAATGGCAAAGGCTGGTGTATCACCCTCGACAAGTTCAGTGAGAGATGGAGAAGTTGATCTGGACAATTTAGAGGTTAAATTTGCAGAGCTTGAAGCTGAGCTAATTGAGAATAATGCGAATAATGATAAGTTGCAGCATAGTTACAGTGAGCTATTAGAATATAAACTCGTTCTGCATAAGGTTGGTGAGTTTTTCTCTCCAGCACAAAAAAGCGCACAATCTCAACAGAGAGAACATGGAGCTCAGAGCAATTCCGAAGGGTCTATTGACAGCCCATTGCTACAGGAACAAGAGATGACAACGGAAACATCAAAGCCAATTAAACTGGGCTTTATCGCTGGCCTTGTTCCAAGAGAAAAATCAATGTCTTTTGAAAGAATTTTATTTCGTGCTACTCGGGGTAACTTTTTTCAGAAGCAAGCCACGATTGAACATCCTGTACTTGATCCTTTGTCAGGAGAGAAGGTTGATAAAAATGTGTTTCTTATCTTTTATTCTGGAGAAAGAGCTAGTAGTAAGATTTTAAAAATATGCGATGCCTTTGGAGCAAATCGTTATCCTTTCACAGACGACTTGAGGAAACAATTTCAGATGATTACAGAGGTGTCTGGAAGACTTTCCGAATTGAAGACTACCATTGATGTTGGATTGCTGCGCAGGAGTGCTATATTGCAGGCAATCGGATATCACTACGGGACGTGGATCCTTCTGGTGAAGAAGGTAAAATCCATTTATCACACTTTGAATATGTTTAACATCGATGTGACAAAGAAATGTCTTGTCGCAGAAGGTTGGTGCCCTGTTTTTGCAACAAATCAGATTCAAAGTGCATTGCAGCGAGCAAGATTGGACAGTAACTCACAAGTTGGGACCATATGCCAGGTTTTACAAACAAAGGGATCACCACCTACCTATTTCCGGATAAACAAATTTACTTCTGCTTTTCAAGAAATTGTAGATGCTTATGGAGTTGCCAAGTACCGTGAGGCAAATCCTGGTGTTTTCACAATCATCACATTTCCATTCCTTTTTGCTGTTATGTTTGGTGATTGGGGGCATGGTATATGTTTATTGCTGGCTACTTTATATTTCATTATCAGGGAGAAGAAATTTTCTAGTCAGAAACTGGGGGACATCGTAGAAATGACTTTTGGTGGCCGCTATGTTATTATGATGATGGCACTGTTCTCAATCTACACAGGATTGATATACAATGAATTCTTCTCTGTTCCATTTGAACTATTCGGGCCATCTGCCTATGGTTGCCGTGATCCTTCATGCAGGGATGCTGGTACAACAGGCCTGATTAGAGTCCGAAGAAATTATCCATTCGGCTTGGATCCTAAATGGCACGGTACTAGGAGTGAATTGCCATTTCTTAACTCCCTAAAGATGAAGATGTCAATCCTACTGGGTGTAGCCCAAATGAACCTTGGAATTATATTGAGTTACTGTAATGCCAAATACTTTGGAAATGACATAAATATCTGGCACCAGTTCATTCCCCAGATGATATTTTTAAACAGTTTGTTCGGCTATCTTTCACTCCTCATTATCGTTAAATGGTGTACTGGATCTCAAGCTGACCTGTATCATGTGATGATATACATGTTCCTAAGTCCAACTGACGATTTGGGTGAAAACCAGCTCTTTGTGGGCCAAAAGCTCCTTCAACTCGTGTTATTAATGTTGGCACTCATTGCTGTTCCTTGGATGCTATTCCCAAAACCCTTTCTCCTGAGGAAGCAACATCAAGAAAGACATCAAGATCAATCTTACTCTTTGCTTCATGCCATCGATGATCCTCTTGAAGCAGAACCACACAGCCACACTGATCACCACGGGGAGTTTGATTTCAGCGAGGTTTTTGTACACCAACTTATACACACAATAGAATTTGTTCTGGGCGCAGTATCCAATACAGCGTCATATTTACGTTTATGGGCTCTCAGTCTTGCTCATTCAGAACTATCAAGTGTATTCTATGACAAAGTTCTACTTCTGGCATGGGGGTTTAACAACATATTCGTACTCATTATTGGCATTGCTGTATTCATATTCGCAACTGTTGGTGTGCTCCTGATAATGGAAACTTTAAGTGCGTTCTTGCACGCTTTGAGGCTCCACTGGGTAGAGTTCCAGAACAAGTTTTACGAAGGAGATGGTTGCAAGTTCAGCCCATTTTCATTTACTTAA 2433 0.4122 MTDGGCFPTMDLLRSEPMQLVQLIIPTESAYRAVSYLGDLGFFQFKDLNAEKSPFQRTYAAQIKRCGEMTRKLRFFKEQMAKAGVSPSTSSVRDGEVDLDNLEVKFAELEAELIENNANNDKLQHSYSELLEYKLVLHKVGEFFSPAQKSAQSQQREHGAQSNSEGSIDSPLLQEQEMTTETSKPIKLGFIAGLVPREKSMSFERILFRATRGNFFQKQATIEHPVLDPLSGEKVDKNVFLIFYSGERASSKILKICDAFGANRYPFTDDLRKQFQMITEVSGRLSELKTTIDVGLLRRSAILQAIGYHYGTWILLVKKVKSIYHTLNMFNIDVTKKCLVAEGWCPVFATNQIQSALQRARLDSNSQVGTICQVLQTKGSPPTYFRINKFTSAFQEIVDAYGVAKYREANPGVFTIITFPFLFAVMFGDWGHGICLLLATLYFIIREKKFSSQKLGDIVEMTFGGRYVIMMMALFSIYTGLIYNEFFSVPFELFGPSAYGCRDPSCRDAGTTGLIRVRRNYPFGLDPKWHGTRSELPFLNSLKMKMSILLGVAQMNLGIILSYCNAKYFGNDINIWHQFIPQMIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDDLGENQLFVGQKLLQLVLLMLALIAVPWMLFPKPFLLRKQHQERHQDQSYSLLHAIDDPLEAEPHSHTDHHGEFDFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGFNNIFVLIIGIAVFIFATVGVLLIMETLSAFLHALRLHWVEFQNKFYEGDGCKFSPFSFT 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1203 810 PIRSF ATP6V0A1 8 810 IPR026028 GO:0000220|GO:0046961
Alju08g1203 810 Coils Coil 92 126 - -
Alju08g1203 810 Pfam V-type ATPase 116kDa subunit family 36 809 IPR002490 GO:0033179|GO:0046961|GO:1902600
Alju08g1203 810 MobiDBLite consensus disorder prediction 147 170 - -
Alju08g1203 810 PANTHER VACUOLAR PROTON ATPASES 12 809 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1203 Alju-ChrAlju08 9052349 9059644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1203 10 809 Primary Pumps ATPases(2) AT4G39080 74.657 0.0 1238