Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1197 ATGGAAACCACTTCAGTCTCCAAGCTGCTACTATTTTCCTTAACGCTCTGTTTTGTGATTTCTGAGCTCGTTCACTGCTCTGTTACTTACGATAGAAAGGCCATTATCATCAATGGCCAAAGAAGAATCCTCATTTCTGGATCCATTCACTATCCCAGAAGCACCCCTGAAATGTGGGAAGATCTCATTTGGAAGGCCAAACATGGAGGTCTTGATGTTATTGACACTTATGTTTTCTGGGATGTCCATGAGCCCTCTCCTGGCAAGTACAATTTTGAAGGGAGGTACGATCTGGTACGGTTCATTAAGACAGTGCAGAAAGTGGGGCTCTATGTTCATCTTCGCATTGGACCTTATGTTTGTGCCGAGTGGAACTTCGGAGGACTTCCTGTTTGGCTCAAGTATGTTCCTGGCATGAGCTTCAGGACTAACAATGGCCCTTTCAAGGCTGCAATGCAAGGATTCACCCAGAAGATTGTGCAGATGATGAAGAATGAAAAGCTATTCCAATCTCAGGGTGGTCCAATCATTCTATCTCAGATTGAGAACGAGTATGGACCAGAAAGTGGGGCACTTGGATCTGCTGGTCACGCATATGTAAATTGGGCTGCACATATGGCCGTTGGATTAGGTACAGGAGTCCCCTGGGTGATGTGCAAGGAAGATGACGCCCCAGATCCTGTGATAAATACATGTAATGGCTTTTACTGTGATGACTTCTCTCCAAATAAACCCTACAAGCCTAGGCTCTGGACCGAGGCTTGGAGTGGCTGGTTTACAGAATTTGGGGGTCCAATTCACCAGCGACCAGTTCAAGATCTAGCATTTGGTGTTGCGCGTTTCATACAAAAGGGTGGTTCATTAGTAAATTACTACATGTACCATGGAGGAACTAACTTTGGACGCTCAGCCGGAGGCCCATTCATCACTACCAGCTACGACTATGATGCTCCCATTGACGAATACGGTCTTATAAGGCAACCTAAATACACTCATTTGAAGGATCTTCATGAAGCTATTAAGCGATGTGAACATGCTTTAGTATCTTCCGATCCTAGTGTTACATCTCTAGGAAGGTTTCAGCAGGCCCATGTGTTCTCATCAGGAAAAACATGTGCAGCTTTTCTAGCAAATTATAATGCAAACTCTGCTGCTAAAGTAACGTTCAATAACAGACACTATGATTTGCCTCCTTGGTCCATAAGCATCCTCCCTGACTGTGGAACTGATGTATTCAACACTGCAAGAGTGAGAGTTCAAACGTCACAGATAAAAATGTCGCCTACCAATTCGAAGTTCTTCTCATGGGAGACCTACGATGAGGATCTTTCATCTCTGGCAGATAGTTCAAGGATTACATCCACTGGACTCCTGGATCAGGTAGACGTTACTAGAGATAGAAGTGACTATCTATGGTACACAACCAGCGTTGACATAAGTTCATCAGAATCATTTCTTAAAGGAGGACACAAACCTAGCATTAGCGTACAATCTGCAGGTCATGCTGTTCATGTGTTTGTTAATGGGCATTTTATAGGTTCGGCTTTTGGAACAAGAGAACAGAGAAGTTGCACATTCAATGGACCCATAAGCCTACATGCTGGAACTAATAAAATTGCTCTTCTCAGCGTAGCTGTTGGATTACCTAATGTTGGCCGGCATTTTGAAACATGGAAGACAGGGATCACAGGTCCAATTATTCTAGATGGACTTGACAAGGGAAAGAAAGATTTAACGCAGCAAAAATGGTCTTATCAGATTGGACTGAAGGGAGAGGCTATGAATTTGGCATCTTCCGAGGAAATCTCATCTGTTGAATGGGTCCAAGATTCACTGGCCACCCAAACACGTCAGCATTTGAAATGGCACAAGGCATATTTCAATGCACCTGTGGGGAACGAACCATTGGCTTTGGACTTGTCAAGTATGGGAAAAGGTCAAGCATGGATCAACGGTCAAAGCATAGGAAGATATTGGATGGCTTATGCGCAGGGCAACTGTAATACCTGTAGCTACGAAAACACATTCCGACCATTTAAATGCCAGCTTGGTTGCGGACAACCTACACAACGATGGTACCACGTTCCAAGGTCATGGTTAAAGCCAACGAAGAATTTGATAGTAATTTTTGAAGAGTTAGGTGGGAATCCTTGGAAAATATCTCTAGTAAAGAGAACAGTACATACTCCTCGTGGCGCTAAATCCGATTCAGACAACTGA 2220 0.4387 METTSVSKLLLFSLTLCFVISELVHCSVTYDRKAIIINGQRRILISGSIHYPRSTPEMWEDLIWKAKHGGLDVIDTYVFWDVHEPSPGKYNFEGRYDLVRFIKTVQKVGLYVHLRIGPYVCAEWNFGGLPVWLKYVPGMSFRTNNGPFKAAMQGFTQKIVQMMKNEKLFQSQGGPIILSQIENEYGPESGALGSAGHAYVNWAAHMAVGLGTGVPWVMCKEDDAPDPVINTCNGFYCDDFSPNKPYKPRLWTEAWSGWFTEFGGPIHQRPVQDLAFGVARFIQKGGSLVNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIRQPKYTHLKDLHEAIKRCEHALVSSDPSVTSLGRFQQAHVFSSGKTCAAFLANYNANSAAKVTFNNRHYDLPPWSISILPDCGTDVFNTARVRVQTSQIKMSPTNSKFFSWETYDEDLSSLADSSRITSTGLLDQVDVTRDRSDYLWYTTSVDISSSESFLKGGHKPSISVQSAGHAVHVFVNGHFIGSAFGTREQRSCTFNGPISLHAGTNKIALLSVAVGLPNVGRHFETWKTGITGPIILDGLDKGKKDLTQQKWSYQIGLKGEAMNLASSEEISSVEWVQDSLATQTRQHLKWHKAYFNAPVGNEPLALDLSSMGKGQAWINGQSIGRYWMAYAQGNCNTCSYENTFRPFKCQLGCGQPTQRWYHVPRSWLKPTKNLIVIFEELGGNPWKISLVKRTVHTPRGAKSDSDN 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1197 739 FunFam Beta-galactosidase 23 343 - -
Alju08g1197 739 PANTHER BETA-GALACTOSIDASE RELATED 21 729 IPR001944 GO:0004553|GO:0005975
Alju08g1197 739 SUPERFAMILY Galactose-binding domain-like 401 572 IPR008979 -
Alju08g1197 739 Gene3D - 441 585 - -
Alju08g1197 739 Pfam Glycosyl hydrolases family 35 35 339 IPR031330 -
Alju08g1197 739 SUPERFAMILY Galactose-binding domain-like 582 729 IPR008979 -
Alju08g1197 739 PRINTS Glycosyl hydrolase family 35 signature 287 302 IPR001944 GO:0004553|GO:0005975
Alju08g1197 739 PRINTS Glycosyl hydrolase family 35 signature 59 77 IPR001944 GO:0004553|GO:0005975
Alju08g1197 739 PRINTS Glycosyl hydrolase family 35 signature 645 661 IPR001944 GO:0004553|GO:0005975
Alju08g1197 739 PRINTS Glycosyl hydrolase family 35 signature 171 186 IPR001944 GO:0004553|GO:0005975
Alju08g1197 739 PRINTS Glycosyl hydrolase family 35 signature 618 632 IPR001944 GO:0004553|GO:0005975
Alju08g1197 739 PRINTS Glycosyl hydrolase family 35 signature 114 133 IPR001944 GO:0004553|GO:0005975
Alju08g1197 739 PRINTS Glycosyl hydrolase family 35 signature 250 265 IPR001944 GO:0004553|GO:0005975
Alju08g1197 739 PRINTS Glycosyl hydrolase family 35 signature 38 55 IPR001944 GO:0004553|GO:0005975
Alju08g1197 739 PRINTS Glycosyl hydrolase family 35 signature 307 323 IPR001944 GO:0004553|GO:0005975
Alju08g1197 739 FunFam Beta-galactosidase 292 419 - -
Alju08g1197 739 Pfam Beta-sandwich domain in beta galactosidase 347 417 IPR041392 -
Alju08g1197 739 Gene3D - 591 731 - -
Alju08g1197 739 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 173 185 IPR019801 GO:0004553|GO:0005975
Alju08g1197 739 Gene3D Glycosidases 24 343 - -
Alju08g1197 739 SUPERFAMILY (Trans)glycosidases 26 343 IPR017853 -
Alju08g1197 739 FunFam Beta-galactosidase 445 582 - -
Alju08g1197 739 FunFam Beta-galactosidase 590 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1197 Alju-ChrAlju08 9011590 9015593 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1197 5 727 Glycoside Hydrolase AT4G36360 72.138 0.0 1123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g2883 07 53927477 53931792 Alju08g1197 08 9011590 9015593 CCT
Alju08g1197 08 9011590 9015593 Alju08g1197 08 9011590 9015593 ECH