Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g1188 ATGATGGGCTCGCCGAGTGGGAATTATACTTGCTTGTCCAATTCCAGGCTTCAGAACTTAGGATCTGATCAAGAGGAGTTAATGCAAATAGCGTTGTTGGAGAAGAAGAGGAAGAGGATGGAAGCGAACCGGTTGTCGGCGAGGCGGTCCAGGAAGCGAAAGCAGAAGTACATGGACGATATGGTGACGGAAGTGGTTGAGCTGAGAAGGGAAAACAGCGAGCTGGTCGCCGGCTTAAACATGGTGATCCACGTGTGTCAGAATGTGGAGGCTGAGAATAGCATTCTGAGGGCCCAGATGGTTGAGCTCACTCACACACTTCGATCTCTGAATCATATCATCGATCTCGTCAACACAACAACAACAACAAGCAGCAGCAGCAGCAGCAGAAGCACTACAACAAGTAACGCGTTGAATTTGGCCGCCGAGAATCCCATGAACATGTTCCTCAGTCATAATCAACCCATGATAATGGCTTGTGCAGACATGTTCCAGTTCTGA 501 0.489 MMGSPSGNYTCLSNSRLQNLGSDQEELMQIALLEKKRKRMEANRLSARRSRKRKQKYMDDMVTEVVELRRENSELVAGLNMVIHVCQNVEAENSILRAQMVELTHTLRSLNHIIDLVNTTTTTSSSSSSRSTTTSNALNLAAENPMNMFLSHNQPMIMACADMFQF 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g1188 166 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 33 75 IPR004827 GO:0003700|GO:0006355
Alju08g1188 166 Gene3D - 33 86 - -
Alju08g1188 166 Pfam bZIP transcription factor 35 89 IPR004827 GO:0003700|GO:0006355
Alju08g1188 166 SUPERFAMILY Leucine zipper domain 35 85 IPR046347 GO:0003700|GO:0006355
Alju08g1188 166 SMART brlzneu 31 95 IPR004827 GO:0003700|GO:0006355
Alju08g1188 166 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 38 53 IPR004827 GO:0003700|GO:0006355
Alju08g1188 166 PANTHER BZIP TRANSCRIPTION FACTOR 44 26 162 - -
Alju08g1188 166 Coils Coil 86 106 - -
Alju08g1188 166 CDD bZIP_plant_GBF1 36 82 IPR045314 GO:0003700|GO:0006355
Alju08g1188 166 FunFam BZIP transcription factor 33 84 - -
Alju08g1188 166 Coils Coil 30 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g1188 Alju-ChrAlju08 8954810 8955310 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g1188 24 166 bZIP Transcription Factor Family AT4G34590 40.541 2.95e-24 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Alju08g1188 bZIP_1 1.1e-09 CL0018